Alternatives and similar repositories for sc-GC:

Users that are interested in sc-GC are comparing it to the libraries listed below

• youqiongye / CRC_scRNAseq
  ☆45Updated 3 years ago
• yqq-chen / CRC_ICB
  ☆29Updated last year
• Aleksobrad / single-cell-rcc-pipeline
  Data files and code for analysis of single-cell ccRCC data for the manuscript "Tumor-Specific Cell Populations in Clear Cell Renal Carcin…
  ☆46Updated 3 years ago
• Yelab2020 / Cottrazm
  Construct Tumor Transition Zone Microenvironment
  ☆42Updated 4 months ago
• teresho4 / scRNA-seq_atlas_Hs_PBMC_aging
  ☆14Updated last year
• aliceygao / pan-Fibroblast
  ☆39Updated 7 months ago
• genecell / COSG
  Accurate and fast cell marker gene identification with COSG
  ☆43Updated last week
• Coolgenome / TCM
  Codes used in pan-T cell analysis
  ☆54Updated 2 years ago
• RegnerM2015 / scENDO_scOVAR_2020
  This repository holds the scripts used to analyze the data presented in "A multi-omic single-cell landscape of human gynecologic malignan…
  ☆41Updated last year
• Core-Bioinformatics / MASLD-NASH
  scripts associated with NAFLD-NASH project
  ☆20Updated 10 months ago
• Japrin / STARTRAC
  STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)
  ☆97Updated last year
• jlaffy / scalop
  Single Cell Analysis Operations
  ☆13Updated 3 weeks ago
• meta-cancer / scPLC
  Codes for the scPLC project
  ☆64Updated 2 years ago
• Chuxj / CRC-atlas
  ☆25Updated 9 months ago
• SiyuanHuang1 / cpplot
  Visualize the results of cell-cell communication analysis
  ☆20Updated 2 years ago
• Teichlab / Genes2Genes
  Aligning gene expression trajectories of single-cell reference and query systems
  ☆63Updated 5 months ago
• bio-Pixel / panVC
  ☆44Updated last year
• yanailab / PanCancer
  Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…
  ☆30Updated 2 years ago
• aet21 / SCENT
  Estimation of Single-Cell Potency with Single Cell Entropy
  ☆40Updated last year
• Teichlab / PanGIAtlas
  Integration of gut cell atlases
  ☆23Updated last month
• matanhofree / crc-immune-hubs
  Principal analysis code used in for analysis of single cell RNAseq of primary untreated colon cancer. As described in: "Spatially organiz…
  ☆39Updated 3 years ago
• Teichlab / Pan_fetal_immune
  Collection of scripts for analysis of pan fetal immune atlas
  ☆26Updated 2 years ago
• lifei176 / Single-cell-atlas-of-sex-differences-and-androgen-effects
  ☆17Updated last year
• shyhihihi / MERCI
  MERCI for tracing of mitochondrion transfer between single cancer and T cells
  ☆21Updated 10 months ago
• Dragonlongzhilin / RenalTumor
  Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma
  ☆77Updated 5 months ago
• FloWuenne / scFunctions
  Functions for single cell data analysis
  ☆31Updated 3 years ago
• KramannLab / visium_heart
  Spatial transcriptomics of heart tissue
  ☆20Updated 2 years ago
• ChanLab-UTSW / BreastCancer_Integrated
  ☆28Updated last month
• Coolgenome / iTALK
  ☆59Updated 5 years ago
• bioinfo-biols / SEVtras
  sEV-containing droplet identification in scRNA-seq data (SEVtras)
  ☆24Updated last month