Alternatives and similar repositories for sc-GC:

Users that are interested in sc-GC are comparing it to the libraries listed below

• yqq-chen / CRC_ICB
  ☆28Updated last year
• Yelab2020 / Cottrazm
  Construct Tumor Transition Zone Microenvironment
  ☆39Updated 2 months ago
• youqiongye / CRC_scRNAseq
  ☆44Updated 2 years ago
• teresho4 / scRNA-seq_atlas_Hs_PBMC_aging
  ☆13Updated last year
• Aleksobrad / single-cell-rcc-pipeline
  Data files and code for analysis of single-cell ccRCC data for the manuscript "Tumor-Specific Cell Populations in Clear Cell Renal Carcin…
  ☆43Updated 3 years ago
• genecell / COSG
  Accurate and fast cell marker gene identification with COSG
  ☆41Updated last year
• aliceygao / pan-Fibroblast
  ☆32Updated 5 months ago
• Core-Bioinformatics / MASLD-NASH
  scripts associated with NAFLD-NASH project
  ☆20Updated 8 months ago
• RegnerM2015 / scENDO_scOVAR_2020
  This repository holds the scripts used to analyze the data presented in "A multi-omic single-cell landscape of human gynecologic malignan…
  ☆35Updated last year
• compbioNJU / scPDAC
  R code used to analyze single cell PDAC data
  ☆31Updated 7 months ago
• FloWuenne / scFunctions
  Functions for single cell data analysis
  ☆29Updated 3 years ago
• jlaffy / scalop
  Single Cell Analysis Operations
  ☆13Updated 10 months ago
• Chuxj / CRC-atlas
  ☆24Updated 7 months ago
• shyhihihi / MERCI
  MERCI for tracing of mitochondrion transfer between single cancer and T cells
  ☆21Updated 8 months ago
• ostunilab / PDAC_Nature_2023
  ☆17Updated 10 months ago
• zhengrongbin / MEBOCOST
  A python-based package and software to predict metabolite mediated cell-cell communications by single-cell RNA-seq data
  ☆71Updated 2 months ago
• ChanLab-UTSW / BreastCancer_Integrated
  ☆25Updated 9 months ago
• yanailab / PanCancer
  Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…
  ☆28Updated 2 years ago
• Coolgenome / TCM
  Codes used in pan-T cell analysis
  ☆53Updated last year
• ma-jq / B
  ☆21Updated 8 months ago
• Teichlab / SKM_ageing_atlas
  ☆12Updated 9 months ago
• yuyang3 / pan-B
  These are scripts for pan-cacner B cells analyses.
  ☆46Updated 6 months ago
• hedyBao / HNSCC_scRNA
  ☆27Updated 10 months ago
• Xiaxy-XuLab / PanCAF
  ☆37Updated 2 years ago
• Junjie-Hu / NSCLC-immunotherapy
  ☆18Updated last year
• Japrin / STARTRAC
  STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)
  ☆92Updated last year
• meta-cancer / scPLC
  Codes for the scPLC project
  ☆60Updated 2 years ago
• matanhofree / crc-immune-hubs
  Principal analysis code used in for analysis of single cell RNAseq of primary untreated colon cancer. As described in: "Spatially organiz…
  ☆39Updated 3 years ago
• Dragonlongzhilin / RenalTumor
  Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma
  ☆76Updated 3 months ago
• aet21 / SCENT
  Estimation of Single-Cell Potency with Single Cell Entropy
  ☆39Updated last year