czhu / FulQuantLinks
FulQuant pipeline to identify and quantify transcript isoforms based on Nanopore long-read data
☆9Updated 2 years ago
Alternatives and similar repositories for FulQuant
Users that are interested in FulQuant are comparing it to the libraries listed below
Sorting:
- ORF Quantification pipeline for Alternative Splicing☆16Updated 4 years ago
- single-cell analysis workflows for double phosphoramidite barcode and UMI Correction (scCOLOR-seq)☆13Updated last year
- End-guided RNA assembler☆15Updated 2 months ago
- Whole genome workflows☆12Updated 7 months ago
- R Package for phasing of single cell Strand-seq data☆10Updated 5 months ago
- ☆16Updated last year
- Workflow for Sequenza, cellularity and ploidy☆19Updated 2 weeks ago
- nanoNOMe (Nucleosome Occupancy and Methylome nanopore sequencing) Analysis☆18Updated 2 years ago
- omics data analysis using clusterProfiler ;)☆13Updated last year
- SpliceWiz is an R package for exploring differential alternative splicing events in splice-aware alignment BAM files.☆18Updated 3 months ago
- The R package "sarlacc" contains a pipeline to analyse nanopore sequencing data. It trims adapter sequences, retrieves optional UMI's, cl…☆13Updated 6 years ago
- FunctionaL Omics Processing platform☆13Updated 11 months ago
- ☆17Updated 11 months ago
- IsoVis enables fast and informative visualization of isoform structures and expression levels.☆9Updated 2 weeks ago
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆23Updated last year
- ☆13Updated 2 years ago
- ☆11Updated 4 years ago
- Predicting TF sequence-specificity similarity with weighted alignments☆13Updated 5 years ago
- Comprehensive and scalable differential splicing analyses☆17Updated 3 months ago
- R package specialized in HLA typing clustering and visualization based on specific similarity metrics☆12Updated 5 years ago
- PyRice is an API to access some Rice public databases at the same time with consistent output. PyRice design is modular and implements a …☆12Updated 6 months ago
- ExTraMapper is a tool to find Exon and Transcript-level Mappings of a given pair of orthologous genes between two organisms using sequenc…☆11Updated 3 years ago
- Pipeline for Quality Control of Ribo-Seq data, selection of P-site offsets, and codon usage statistics.☆18Updated last year
- Computational analyses of WGS, mate-pair, RNA-seq, Hi-C and Capture-C data from highly rearranged balancer chromosomes in Drosophila mela…☆10Updated 5 years ago
- ☆12Updated 4 years ago
- A pipeline to identify gene family using mutiple tools and scripts.☆11Updated 3 years ago
- ☆23Updated 4 years ago
- Scripts used in the analysis of C elegans dRNAseq data☆14Updated last year
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆20Updated 6 years ago
- ☆8Updated 2 years ago