Flexibility-conditioned protein structure design
☆36Mar 10, 2026Updated 4 months ago
Alternatives and similar repositories for flips
Users that are interested in flips are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Fast protein backbone flexibility prediction model☆36Jan 4, 2026Updated 6 months ago
- A flow matching model for generating conformational ensembles of protein backbones.☆47May 22, 2026Updated last month
- Geometric Algebra Flow Matching (GAFL) for Protein Backbone Generation☆20May 5, 2026Updated 2 months ago
- SableBind is an open-source framework dedicated to predicting protein-ligand binding affinity☆13Feb 6, 2025Updated last year
- Code for the paper "Learning to engineer protein flexibility".☆22Mar 24, 2026Updated 3 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Codebase of the paper "Aligning Protein Conformation Ensemble Generation with Physical Feedback" (ICML 2025)☆18Jul 6, 2025Updated last year
- ☆12Nov 16, 2023Updated 2 years ago
- Software for the prediction of FRET data from conformational ensembles.☆24Dec 19, 2024Updated last year
- ☆12Apr 21, 2026Updated 3 months ago
- A machine learned Molecular Mechanics force field with integration into GROMACS and OpenMM☆63Jul 9, 2026Updated last week
- Sidechain conditioning and modeling for full-atom protein sequence design☆144Nov 11, 2025Updated 8 months ago
- Code for running BinderFlow☆66Jun 22, 2026Updated 3 weeks ago
- Biasing Conformational Sampling in AlphaFold 3 and Boltz-2 via Pair Representation Scaling☆29Jul 6, 2026Updated 2 weeks ago
- ☆11Mar 31, 2026Updated 3 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A standardized protein design benchmark for motif-scaffolding problems☆83Updated this week
- ☆54Apr 22, 2026Updated 2 months ago
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆82May 1, 2026Updated 2 months ago
- ☆33Dec 6, 2025Updated 7 months ago
- Inpainting protein sequence and structure☆12Nov 10, 2023Updated 2 years ago
- Feynman-Kac steering for controllable protein diffusion☆37Jan 14, 2026Updated 6 months ago
- Combines FRESEAN mode analysis of a protein (based on a CG representation) with enhanced sampling using metadynamics☆16May 7, 2026Updated 2 months ago
- Environment for developing substructure-aware protein models☆16Mar 26, 2026Updated 3 months ago
- PyRosetta4 v2026-02-06 with (Global Interpreter Lock) disabled☆20Mar 22, 2026Updated 3 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Design a local part of a protein☆20Jan 12, 2023Updated 3 years ago
- ☆30Aug 8, 2025Updated 11 months ago
- ☆67Updated this week
- PENSA - a collection of python methods for exploratory analysis and comparison of biomolecular conformational ensembles.☆151Feb 12, 2025Updated last year
- Extension of ThermoMPNN for double mutant predictions☆63Mar 23, 2026Updated 3 months ago
- Protein Language Modeling beyond static folds reveals sequence-encoded flexibility☆36Feb 1, 2026Updated 5 months ago
- Biomolecular co-folding, binder filtering, and nanobody design☆81Jun 28, 2026Updated 3 weeks ago
- protein structure generation with sparse all-atom denoising models☆63Jul 7, 2026Updated 2 weeks ago
- ☆72May 18, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Modelling protein conformational landscape with Alphafold☆61Aug 29, 2025Updated 10 months ago
- ☆142Jun 16, 2026Updated last month
- Potts model-based protein sequence design☆107Jul 1, 2026Updated 2 weeks ago
- [NeurIPS 25 Spotlight] Protein Design with Dynamic Protein Vocabulary☆21Nov 23, 2025Updated 7 months ago
- A partially latent flow matching model for the joint generation of a protein’s amino acid sequence and full atomistic structure, includin…☆304Sep 23, 2025Updated 9 months ago
- ☆257Feb 12, 2026Updated 5 months ago
- Design platform for creating single-chain polyhedral cages made from coiled-coil building modules☆24Oct 12, 2017Updated 8 years ago