Christensen-Lab-Dartmouth / methyLiftoverLinks
A utility to map bisulfite sequencing data to the Illumina 450K methylation CpG set
☆17Updated 9 years ago
Alternatives and similar repositories for methyLiftover
Users that are interested in methyLiftover are comparing it to the libraries listed below
Sorting:
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated 2 years ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 2 months ago
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 4 years ago
- countsimQC - Compare characteristic features of count data sets☆27Updated 2 weeks ago
- ☆10Updated 6 years ago
- Repository for signature genes from Immune Cell Atlas☆18Updated 5 years ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆29Updated 2 months ago
- R package for plotting 3D graphical visualization of multi-omics data.☆22Updated 3 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated last month
- A R package for Grade of Membership model and Visualization of counts data:☆31Updated 4 years ago
- Workshop for CNV analysis with Bioconductor☆17Updated 6 months ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- Glimma R package☆50Updated 10 months ago
- R package providing Variance Stabilizing Transformations appropriate for RNA-Seq data☆21Updated last month
- R package for benchmarking single cell analysis methods☆31Updated last year
- A small R package to make sequencing read coverage plots in R.☆39Updated 3 years ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆19Updated 2 years ago
- An R package for multi-dimensional pathway enrichment analysis☆16Updated 3 months ago
- Evolutionary frequency visualization tool of temporal data☆22Updated 3 years ago
- Toolbox package for organizing and working with TCGA data☆28Updated last week
- Decomposition of heterogeneous DNA methylomes☆23Updated last year
- Toolkit for QTL mapping and meta-analysis.☆17Updated 3 years ago
- Sample code for ldsc analyses in UKBB☆31Updated 2 years ago
- Transcript quantification import with automatic metadata detection☆68Updated 3 weeks ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- Gene-level general linear mixed model☆22Updated 6 months ago
- zero-inflated negative binomial gene expression in R☆20Updated 7 years ago
- A Practical (And Opinionated) Guide To Analyzing 450K Data☆35Updated 10 years ago
- A method to rapidly assess cell type identity using both functional and random gene sets☆13Updated 6 years ago
- R wrapper for utilizing the SigProfilerMatrixGenerator framework☆20Updated 2 years ago