Alternatives and similar repositories for stain-transformation

Users that are interested in stain-transformation are comparing it to the libraries listed below

• smujiang / Re-stained_WSIs_Registration
  Re-stained whole slide image alignment
  ☆33Updated last year
• MaryamHaghighat / PathProfiler
  Pipeline for computational pathology
  ☆35Updated last year
• sophiajw / HistAuGAN
  ☆44Updated 2 years ago
• andreped / fast-stain-normalization
  GPU-accelerated stain normalization command line tool
  ☆21Updated last year
• MWod / ANHIR_MW
  Software used by the AGH team during the ANHIR challenge.
  ☆27Updated 4 years ago
• mahmoodlab / CRANE
  Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine
  ☆31Updated 3 years ago
• AGFoersch / MultiStainDeepLearning
  Code from Foersch et al. (Under Construction / Development)
  ☆36Updated last year
• sebastianffx / stainlib
  Python 3 library for the augmentation & normalization of H&E images
  ☆56Updated 2 years ago
• KatherLab / HIA
  Histopathology Image Analysis
  ☆92Updated last year
• impromptuRong / hd_wsi
  ☆35Updated 3 months ago
• jlevy44 / WSI-GTFE
  Topological Feature Extraction on Whole Slide Images using Graph Neural Networks.
  ☆23Updated 4 years ago
• BiomedicalMachineLearning / HEMnet
  A neural network software for using Molecular labelling to improve pathological annotation of H and E tissues
  ☆32Updated 4 months ago
• andreped / NoCodeSeg
  🔬 Code-free deep segmentation for computational pathology
  ☆53Updated last year
• DIAGNijmegen / pathology-he-auto-augment
  H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.
  ☆54Updated 2 years ago
• TissueImageAnalytics / CoNIC
  CoNIC Challenge
  ☆63Updated last year
• DeepMIALab / AI-FFPE
  Deep Learning-based Frozen Section to FFPE Translation
  ☆56Updated 8 months ago
• vqdang / H2T
  ☆35Updated 2 years ago
• WeisiX / ITAS3D
  Image-translation-assisted segmentation in 3D
  ☆26Updated 3 years ago
• wenqi006 / SlideGraph
  ☆55Updated 3 years ago
• mahmoodlab / varpool
  Variance pooling to incorporate ITH in CPath models - MICCAI 2022
  ☆24Updated 2 years ago
• clemsgrs / hs2p
  Histopathology Slides Preprocessing Pipeline
  ☆38Updated 3 months ago
• KatherLab / preProcessing
  ☆45Updated 2 years ago
• AI4SCR / VirtualMultiplexer
  A generative toolkit to translate H&E images to multiplexed IHC
  ☆43Updated 6 months ago
• markowetzlab / pathml-tutorial
  A tutorial demonstration of pathml on an example dataset for the manuscript "PathML: A unified framework for WSI analysis with deep learn…
  ☆24Updated 3 years ago
• TissueImageAnalytics / TILAb-Score
  This repository contains the implementation of TILAb-score as described in the original paper.
  ☆18Updated 5 years ago
• Biooptics2021 / PathFinder
  ☆52Updated 2 years ago
• markowetzlab / pathml
  A Python library for deep learning on whole-slide images
  ☆53Updated 3 years ago
• lucasrla / wsi-preprocessing
  Simple library for preprocessing histopathological whole-slide images (WSI) into tiles (a.k.a. patches) towards deep learning
  ☆55Updated last year
• haranrk / DigiPathAI
  Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay
  ☆72Updated 5 months ago
• PathologyDataScience / NuCLS
  NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation
  ☆54Updated 3 years ago