masih4 / NuInsSegLinks
NuInsSeg: A Fully Annotated Dataset for Nuclei Instance Segmentation in H&E-Stained Histological Images
☆33Updated last year
Alternatives and similar repositories for NuInsSeg
Users that are interested in NuInsSeg are comparing it to the libraries listed below
Sorting:
- ☆20Updated 2 years ago
- ☆56Updated 3 years ago
- One Model is All You Need: Multi-Task Learning Enables Simultaneous Histology Image Segmentation and Classification☆93Updated 9 months ago
- GrandQC tool for tissue detection and quality control in pathology☆61Updated 5 months ago
- NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation☆54Updated 3 years ago
- Pipeline for computational pathology☆38Updated last year
- A Python library for deep learning on whole-slide images☆53Updated 3 years ago
- A neural network software for using Molecular labelling to improve pathological annotation of H and E tissues☆32Updated 7 months ago
- Tools for whole slide image (WSI) processing. Especially for (pairwise) patch extraction, annotation parsing and data preparation for dee…☆55Updated 8 months ago
- A tutorial demonstration of pathml on an example dataset for the manuscript "PathML: A unified framework for WSI analysis with deep learn…☆24Updated 3 years ago
- ☆14Updated 6 months ago
- Python 3 library for the augmentation & normalization of H&E images☆58Updated 2 years ago
- Encoder-Decoder Cell and Nuclei segmentation models☆93Updated 2 weeks ago
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆102Updated 7 months ago
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆105Updated 9 months ago
- ☆139Updated last month
- Multimodal deep learning to predict distant recurrence-free probability from digitized H&E tumour slide and tumour stage.☆42Updated 8 months ago
- A pipeline to segment tissue from the background in histological images☆69Updated 2 years ago
- Awesome Domain Generalization for Computational Pathology☆18Updated 9 months ago
- A Python package for handling histopathology whole-slide images using multiple instance learning (MIL) techniques.☆29Updated last year
- Deep Learning-based Frozen Section to FFPE Translation☆63Updated 10 months ago
- Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)☆81Updated last year
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆68Updated 2 years ago
- Code for the im4MEC model described in the paper 'Interpretable deep learning model to predict the molecular classification of endometria…☆49Updated last year
- ☆63Updated 11 months ago
- ☆36Updated 2 years ago
- 🔬 Code-free deep segmentation for computational pathology☆55Updated last year
- Histopathology Slides Preprocessing Pipeline☆42Updated 5 months ago
- End-to-end pipeline to go from raw H&E slides to normalised extracted features for training☆27Updated last year
- Histopathology Image Analysis☆92Updated 2 years ago