Alternatives and similar repositories for NuInsSeg:

Users that are interested in NuInsSeg are comparing it to the libraries listed below

• cpath-ukk / grandqc
  GrandQC tool for tissue detection and quality control in pathology
  ☆38Updated last month
• TissueImageAnalytics / cerberus
  One Model is All You Need: Multi-Task Learning Enables Simultaneous Histology Image Segmentation and Classification
  ☆87Updated 4 months ago
• wenqi006 / SlideGraph
  ☆53Updated 3 years ago
• PathologyDataScience / NuCLS
  NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation
  ☆54Updated 3 years ago
• MaryamHaghighat / PathProfiler
  Pipeline for computational pathology
  ☆34Updated last year
• KatherLab / cancer-metadata
  machine-readable information for the TCGA dataset, mirrored from other sources
  ☆18Updated 2 years ago
• BiomedicalMachineLearning / HEMnet
  A neural network software for using Molecular labelling to improve pathological annotation of H and E tissues
  ☆31Updated 2 months ago
• huangzhii / IMPRESS
  ☆19Updated 2 years ago
• AIRMEC / HECTOR
  Multimodal deep learning to predict distant recurrence-free probability from digitized H&E tumour slide and tumour stage.
  ☆38Updated 4 months ago
• vqdang / H2T
  ☆35Updated 2 years ago
• fmhoward / HistoXGAN
  Accurate encoding of histologic images into StyleGAN space for discovery and explainability
  ☆10Updated 4 months ago
• mahmoodlab / CRANE
  Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine
  ☆31Updated 2 years ago
• AdalbertoCq / Histomorphological-Phenotype-Learning
  Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…
  ☆58Updated 2 months ago
• impromptuRong / hd_wsi
  ☆30Updated 3 weeks ago
• peng-lab / HistoBistro
  Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)
  ☆68Updated last year
• secrierlab / HistoMIL
  A Python package for handling histopathology whole-slide images using multiple instance learning (MIL) techniques.
  ☆29Updated 10 months ago
• simongraham / hovernet_inference
  HoVer-Net inference code for simultaneous nuclear segmentation and classification
  ☆67Updated 2 years ago
• AGFoersch / MultiStainDeepLearning
  Code from Foersch et al. (Under Construction / Development)
  ☆36Updated last year
• marrlab / HistoGPT
  A vision language model for gigapixel whole slide images in histopathology
  ☆37Updated 6 months ago
• DIAGNijmegen / pathology-hooknet
  ☆57Updated 6 months ago
• georg-wolflein / good-features
  Official code for the paper "A Good Feature Extractor Is All You Need for Weakly Supervised Pathology Slide Classification"
  ☆18Updated 8 months ago
• qupath / qupath-extension-wsinfer
  QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/
  ☆24Updated this week
• mahmoodlab / MADELEINE
  MADELEINE: multi-stain slide representation learning (ECCV'24)
  ☆49Updated last month
• okunator / cellseg_models.pytorch
  Encoder-Decoder Cell and Nuclei segmentation models
  ☆89Updated last month
• sebastianffx / stainlib
  Python 3 library for the augmentation & normalization of H&E images
  ☆54Updated 2 years ago
• Cassie07 / Review_Molecular_profile_prediction_GNN
  [The Lancet Digital Health, MICCAI2020 Oral] The official code of "Spatially-aware Graph Neural Networks and Cross-level Molecular Profil…
  ☆26Updated last year
• javadnoorb / HistCNN
  A set of codes to classify H&E slides using deep learning
  ☆30Updated 3 years ago
• kmboehm / orpheus
  ☆13Updated last month
• choosehappy / PatchSorter
  A tool for rapidly labeling objects using deep learning feature embedding
  ☆31Updated 8 months ago
• smujiang / Re-stained_WSIs_Registration
  Re-stained whole slide image alignment
  ☆33Updated last year