Alternatives and similar repositories for PathoNet

Users that are interested in PathoNet are comparing it to the libraries listed below

• simongraham / hovernet_inference
  HoVer-Net inference code for simultaneous nuclear segmentation and classification
  ☆69Updated 2 years ago
• navidstuv / NuClick
  Interactive Segmentation of Nucleus
  ☆66Updated 2 years ago
• smujiang / Re-stained_WSIs_Registration
  Re-stained whole slide image alignment
  ☆35Updated 2 years ago
• PathologyDataScience / NuCLS
  NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation
  ☆55Updated 3 years ago
• DIAGNijmegen / pathology-hooknet
  ☆65Updated last year
• haranrk / DigiPathAI
  Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay
  ☆73Updated 9 months ago
• DIAGNijmegen / pathology-he-auto-augment
  H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.
  ☆57Updated 2 years ago
• DIAGNijmegen / pathology-streaming-pipeline
  Use streaming to train whole-slides images with single image-level labels, by reducing GPU memory requirements with 99%.
  ☆79Updated 2 years ago
• DIAGNijmegen / pathology-whole-slide-data
  A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.
  ☆107Updated this week
• MHMAILab / auto_lymph
  Predicting gastric cancer outcome from resected lymph node histopathology images using deep learning
  ☆35Updated 4 years ago
• choosehappy / QuPathGeoJSONImportExport
  Coincides with blogpost for using geojson and shapely
  ☆33Updated 4 years ago
• YashSharma / C2C
  Implementation of Cluster-to-Conquer: A Framework for End-to-End Multi-Instance Learning for Whole Slide Image Classification approach.
  ☆61Updated 4 years ago
• andreped / NoCodeSeg
  🔬 Code-free deep segmentation for computational pathology
  ☆56Updated last year
• sebastianffx / stainlib
  Python 3 library for the augmentation & normalization of H&E images
  ☆62Updated 3 years ago
• TissueImageAnalytics / CoNIC
  CoNIC Challenge
  ☆69Updated last year
• jopo666 / HistoPrep
  Preprocessing module for large histological images
  ☆21Updated 2 years ago
• hacylu / FLocK
  Code and GUI for Feature-driven Local Cell Graph (FLocK): New Computational Pathology based descriptors
  ☆16Updated 2 years ago
• choosehappy / QuickAnnotator
  An open-source digital pathology based rapid image annotation tool
  ☆86Updated 2 weeks ago
• KatherLab / HIA
  Histopathology Image Analysis
  ☆92Updated 2 years ago
• vqdang / H2T
  ☆37Updated 2 years ago
• PhilipChicco / MICCAI2020mil
  MICCAI2020. "Multiple Instance Learning with Center Embeddings for Histopathology Image Classification"
  ☆38Updated 4 years ago
• wenqi006 / SlideGraph
  ☆57Updated 3 years ago
• andreped / fast-stain-normalization
  GPU-accelerated stain normalization command line tool
  ☆23Updated 2 years ago
• SBU-BMI / quip_cancer_segmentation
  ☆17Updated 3 years ago
• masih4 / CryoNuSeg
  This repository includes the codes and descriptions to create a fully annotated dataset of nuclei from cryosectioned histological samples…
  ☆42Updated 2 years ago
• hasibzunair / MoNuSAC-ISBI-2020
  [TMI'2021][ISBI MoNuSAC'2020] 11th place solution to Multi-organ nuclei segmentation and classification challenge.
  ☆31Updated 4 years ago
• srinidhiPY / SSL_CR_Histo
  Official code for "Self-Supervised driven Consistency Training for Annotation Efficient Histopathology Image Analysis" Published in Medic…
  ☆60Updated 3 years ago
• wanghao14 / Stain_Normalization
  Some stain normalization code
  ☆91Updated 3 years ago
• alexjfoote / reetoolbox
  Toolbox for measuring adversarial robustness to many transforms
  ☆19Updated 6 months ago
• kevindehaan / stain-transformation
  ☆46Updated 3 years ago