Pathomation / pma_pythonLinks
Python wrapper library for PMA.start, a universal viewier for whole slide imaging and microscopy
☆33Updated last year
Alternatives and similar repositories for pma_python
Users that are interested in pma_python are comparing it to the libraries listed below
Sorting:
- Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay☆74Updated 11 months ago
- Re-stained whole slide image alignment☆36Updated 2 years ago
- Whole Slide Digital Pathology Image Tissue Localization☆45Updated 2 years ago
- ☆66Updated last year
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆107Updated last month
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆57Updated 2 years ago
- Interactive Segmentation of Nucleus☆66Updated 3 years ago
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆70Updated 3 years ago
- Simple library for preprocessing histopathological whole-slide images (WSI) into tiles (a.k.a. patches) towards deep learning☆56Updated 2 years ago
- An open-source digital pathology based rapid image annotation tool☆89Updated this week
- Histopathology Image Analysis☆92Updated 2 years ago
- 🔬 Code-free deep segmentation for computational pathology☆56Updated last year
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆38Updated last year
- Codes for Fast GPU-Enabled Color Normalization of Whole Slide Images in Digital Pathology☆75Updated 5 years ago
- A simple web application for for viewing and navigating pathology whole-slide-images in your browser.☆16Updated 2 years ago
- GPU-accelerated stain normalization command line tool☆24Updated 2 years ago
- This repository provides scripts to reproduce the results in the paper "An annotation-free whole-slide training approach to pathological …☆64Updated 4 years ago
- Coincides with blogpost for using geojson and shapely☆33Updated 5 years ago
- H&E histopathological staining normalization☆109Updated 5 years ago
- ⚡ Open-source software for deep learning-based digital pathology☆139Updated last year
- Python package for dealing with whole slide images (.svs) for machine learning, particularly for fast prototyping. Includes patch samplin…☆163Updated last year
- List of academic institutes/companies working on computer-based digital pathology image analysis☆45Updated 4 months ago
- The official deployment of the Digital Slide Archive and HistomicsTK.☆131Updated last week
- HistoSegNet: Semantic Segmentation of Histological Tissue Type in Whole Slide Images (ICCV 2019)☆94Updated 5 years ago
- Whole Slide Image segmentation with weakly supervised multiple instance learning on TCGA | MICCAI2020 https://arxiv.org/abs/2004.05024☆142Updated 4 years ago
- A pipeline to segment tissue from the background in histological images☆71Updated 2 years ago
- This repository contains the implementation of TILAb-score as described in the original paper.☆18Updated 6 years ago
- Delete the label from a whole-slide image☆65Updated 4 years ago
- AI-based pathology predicts origins for cancers of unknown primary - Nature☆177Updated 4 years ago
- Some stain normalization code☆93Updated 3 years ago