H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.
☆56Jun 20, 2023Updated 3 years ago
Alternatives and similar repositories for pathology-he-auto-augment
Users that are interested in pathology-he-auto-augment are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python 3 library for the augmentation & normalization of H&E images☆66Sep 12, 2022Updated 4 years ago
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆39Jan 25, 2024Updated 2 years ago
- Official repository of Benchmarking Self-Supervised Learning on Diverse Pathology Datasets☆94May 23, 2023Updated 3 years ago
- Stain normalization tools for histological analysis and computational pathology☆194Nov 13, 2025Updated 11 months ago
- Self-Supervised Vision Transformers Learn Visual Concepts in Histopathology (LMRL Workshop, NeurIPS 2021)☆146Jun 9, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Use streaming to train whole-slides images with single image-level labels, by reducing GPU memory requirements with 99%.☆79Jan 9, 2023Updated 3 years ago
- HistoQC is an open-source quality control tool for digital pathology slides☆332Sep 16, 2026Updated last month
- Toolbox for measuring adversarial robustness to many transforms☆19Apr 24, 2025Updated last year
- This is the official code for the paper Learning Represenations with Contrastive Self-Supervised Learning for Histopathology Applications☆13Aug 17, 2022Updated 4 years ago
- A standardized Python API with necessary preprocessing, machine learning and explainability tools to facilitate graph-analytics in comput…☆275Dec 23, 2023Updated 2 years ago
- An open-source digital pathology based rapid image annotation tool☆93Oct 28, 2026Updated last week
- ☆43Jul 18, 2022Updated 4 years ago
- Pretrained model for self supervised histopathology☆121Jun 27, 2022Updated 4 years ago
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆119Nov 8, 2025Updated 11 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆26Jul 16, 2024Updated 2 years ago
- Gpu accelerated vahadane stain normalization for Digital Pathology workflows.☆28Feb 23, 2024Updated 2 years ago
- ☆77Sep 23, 2024Updated 2 years ago
- Tools for tissue image stain normalisation and augmentation in Python 3☆348May 8, 2021Updated 5 years ago
- A Python library for deep learning on whole-slide images☆53Nov 5, 2021Updated 5 years ago
- [ICCV 2023 Oral, IJCV 2025] Multiple Instance Learning Framework with Masked Hard Instance Mining for Whole Slide Image Classification☆98Jan 7, 2026Updated 10 months ago
- ☆12Jan 18, 2023Updated 3 years ago
- GPU-accelerated stain normalization command line tool☆25Oct 19, 2023Updated 3 years ago
- Image-to-Image Translation in PyTorch☆24Sep 21, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- [MICCAI'23] HIGT: Hierarchical Interaction Graph-Transformer for Whole Slide Image Analysis☆32Sep 14, 2024Updated 2 years ago
- Some stain normalization code☆94Oct 9, 2022Updated 4 years ago
- Repository for Hierarchical Attention-Guided Multiple Instance Learning☆24Oct 11, 2023Updated 3 years ago
- Use this to download all elements of the BCSS dataset described in: Amgad M, Elfandy H, ..., Gutman DA, Cooper LAD. Structured crowdsourc…☆187Apr 1, 2022Updated 4 years ago
- ☆17Nov 3, 2023Updated 3 years ago
- Digital Pathology Whole Slide Image Analysis Toolbox☆55Apr 2, 2023Updated 3 years ago
- MItosis DOmain Generalization Challenge 2021/2022☆14Jun 19, 2022Updated 4 years ago
- [CVPR 2024] Self-Supervised Vision Mamba for Histopathology Images☆60Jul 23, 2025Updated last year
- Hierarchical Image Pyramid Transformer - CVPR 2022 (Oral)☆621Mar 19, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Predicting Ovarian Cancer Treatment Response in Histopathology using Hierarchical Vision Transformers and Multiple Instance Learning☆13Nov 29, 2023Updated 2 years ago
- ☆21Jun 3, 2024Updated 2 years ago
- Dataset of 9536 H&E-stained patches for colorectal polyps classification and adenomas grading | ICIP21 https://doi.org/10.1109/ICIP42928.…☆36May 18, 2023Updated 3 years ago
- Code associated to the publication: Scaling self-supervised learning for histopathology with masked image modeling, A. Filiot et al., Med…☆169Jan 29, 2024Updated 2 years ago
- Whole Slide Image segmentation with weakly supervised multiple instance learning on TCGA | MICCAI2020 https://arxiv.org/abs/2004.05024☆145Aug 5, 2021Updated 5 years ago
- Bayesian Inference of Slide-level Confidence via Uncertainty Index Thresholding☆30Sep 6, 2024Updated 2 years ago
- Powerful, open-source AI tools for digital pathology.☆376Oct 5, 2026Updated last month