Alternatives and similar repositories for HistoReg

Users that are interested in HistoReg are comparing it to the libraries listed below

• Borda / dataset-histology-landmarks
  Dataset: landmarks for registration of histology images
  ☆33Updated 4 years ago
• Borda / BIRL
  BIRL: Benchmark on Image Registration methods with Landmark validations
  ☆93Updated 3 years ago
• MWod / ANHIR_MW
  Software used by the AGH team during the ANHIR challenge.
  ☆28Updated 4 years ago
• navidstuv / NuClick
  Interactive Segmentation of Nucleus
  ☆66Updated 2 years ago
• DIAGNijmegen / pathology-streaming-pipeline
  Use streaming to train whole-slides images with single image-level labels, by reducing GPU memory requirements with 99%.
  ☆79Updated 2 years ago
• haranrk / DigiPathAI
  Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay
  ☆73Updated 8 months ago
• DIAGNijmegen / pathology-artifact-detection
  Quality control of whole-slide images through multi-class semantic segmentation of artifacts
  ☆36Updated last year
• andreped / NoCodeSeg
  🔬 Code-free deep segmentation for computational pathology
  ☆56Updated last year
• SarderLab / tf-WSI-dataset-utils
  An optimized pipeline for working with Whole Slide Image (WSI) data in Tensorflow
  ☆15Updated 4 years ago
• kevindehaan / stain-transformation
  ☆46Updated 3 years ago
• computationalpathologygroup / WSICS
  WSICS
  ☆30Updated 6 years ago
• choosehappy / QuickAnnotator
  An open-source digital pathology based rapid image annotation tool
  ☆86Updated this week
• DIAGNijmegen / pathology-he-auto-augment
  H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.
  ☆57Updated 2 years ago
• sophiajw / HistAuGAN
  ☆43Updated 3 years ago
• PingjunChen / tissueloc
  Whole Slide Digital Pathology Image Tissue Localization
  ☆45Updated 2 years ago
• smujiang / Re-stained_WSIs_Registration
  Re-stained whole slide image alignment
  ☆35Updated last year
• AICAN-Research / FAST-Pathology
  ⚡ Open-source software for deep learning-based digital pathology
  ☆138Updated last year
• PingjunChen / pyslide
  Digital Pathology Whole Slide Image Analysis Toolbox
  ☆51Updated 2 years ago
• nadeemlab / ImPartial
  Interactive deep learning whole-cell segmentation and thresholding using partial annotations
  ☆39Updated last month
• DigitalSlideArchive / HistomicsUI
  A Girder plugin for pathology image annotations and analysis.
  ☆74Updated last week
• ChristianMarzahl / WsiRegistration
  Robust quad-tree based registration on whole slide images
  ☆21Updated 6 months ago
• DeepMicroscopy / SlideRunner
  SlideRunner is a tool for massive cell annotations in whole slide images
  ☆79Updated 2 months ago
• Project-MONAI / MetricsReloaded
  ☆91Updated 4 months ago
• masih4 / DigiPathoImageAnalysis
  List of academic institutes/companies working on computer-based digital pathology image analysis
  ☆43Updated 2 months ago
• masadcv / ECONet-MONAILabel
  Official Implementation of ECONet: Efficient Convolutional Online Likelihood Network for Interactive Segmentation
  ☆18Updated 2 years ago
• jlevy44 / PathFlow-MixMatch
  Don't mix, match! Simple utilities for improved registration of Histopathology Whole Slide Images.
  ☆11Updated 5 years ago
• andreped / fast-stain-normalization
  GPU-accelerated stain normalization command line tool
  ☆22Updated last year
• srinidhiPY / SSL_CR_Histo
  Official code for "Self-Supervised driven Consistency Training for Annotation Efficient Histopathology Image Analysis" Published in Medic…
  ☆62Updated 3 years ago
• DSLituiev / slideslicer
  a toolbox for manipulation of digital pathology slides and annotations
  ☆19Updated 5 years ago
• stanfordmlgroup / DLBCL-Morph
  DLBCL-Morph dataset containing high resolution tissue microarray scans from 209 DLBCL cases, with geometric features computed using deep …
  ☆38Updated 4 years ago