GeneMANIA helps you predict the function of your favourite genes and gene sets.
☆45Sep 29, 2025Updated 7 months ago
Alternatives and similar repositories for genemania
Users that are interested in genemania are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Kdrew's scripts for handling protein complex map data☆14Apr 23, 2026Updated last week
- ☆10Oct 17, 2019Updated 6 years ago
- Gene network analysis☆20Dec 2, 2022Updated 3 years ago
- Public version of the AIDD consortium code base☆11Mar 25, 2025Updated last year
- Biological Network Integration using Convolutions☆64Jan 17, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- MethGo: a comprehensive tool for analyzing whole-genome bisulfite sequencing data☆22Apr 24, 2017Updated 9 years ago
- Enhanced Chromatin Occupancy (EChO)☆13Jan 8, 2020Updated 6 years ago
- NetICS: network-based integration of multi-omics data for prioritizing cancer genes☆16Jun 27, 2021Updated 4 years ago
- A tutorial on how to annotate and interpret novel mammalian reference genomes☆25Mar 4, 2026Updated last month
- a Graph database and R package for omic data integration☆19Oct 28, 2016Updated 9 years ago
- This repository is related to the blogpost☆35Jun 25, 2019Updated 6 years ago
- Bayesian analysis of MPRA and other high-throughput genomic assays☆10Jul 27, 2020Updated 5 years ago
- Post variant-calling QC pipeline for orienting cohort data with a reference file. Additional steps for merging and phasing with a referen…☆11Jun 10, 2019Updated 6 years ago
- A software package for detection of copy number alterations from tumor samples☆12May 8, 2015Updated 10 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆41Nov 18, 2021Updated 4 years ago
- Viscello for Visualization of Single Cell Data☆26Oct 5, 2024Updated last year
- WGS (Wheat) Robust Assembly Pipeline☆22Sep 4, 2021Updated 4 years ago
- Step-wise assembly of the neonatal virome modulated by breast feeding.☆11Aug 20, 2021Updated 4 years ago
- Pipelines for NGS, imputation, gwas, ...☆30Dec 18, 2019Updated 6 years ago
- A tutorial for running Tractor and Tractor-Mix on toy datasets, including step-by-step instructions for preparing data, estimating PCs an…☆11Dec 22, 2025Updated 4 months ago
- Integrated platform for unifying scientific workflow management and graph databases for transcriptome data analysis.☆10Oct 19, 2018Updated 7 years ago
- This is the public repository for the EPIC tool.☆19Aug 3, 2022Updated 3 years ago
- Python 2.7 package with examples for evaluating a network's ability to group a given node set in network proximity.☆34Mar 24, 2023Updated 3 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Bioinformatics learning (for high performance computing, big data, and machine learning)☆19Jun 8, 2017Updated 8 years ago
- ☆15Jun 4, 2023Updated 2 years ago
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆11Jan 21, 2024Updated 2 years ago
- Code to reproduce analyses in Nasser, Bergman, Fulco, Guckelberger, Doughty et al Nature 2021☆16Apr 8, 2021Updated 5 years ago
- Analyses related to the Borzoi paper.☆26Dec 14, 2025Updated 4 months ago
- An alignment-free approach to estimating exon-inclusion ratios without a reference transcriptome☆10Jan 25, 2019Updated 7 years ago
- Web app for visualizing models of small-scale gene regulatory and protein-protein interaction networks.☆17Updated this week
- LLM Agent that leverages cheminformatics tools to provide informed responses.☆50Apr 7, 2026Updated 3 weeks ago
- A python tool to detect internal tandem duplication with robust variant allele frequency estimation☆12Feb 3, 2026Updated 2 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Tandem Repeat Annotation Library☆25Mar 30, 2023Updated 3 years ago
- Getting started docs, examples, tutorials, and use cases.☆11Jun 15, 2021Updated 4 years ago
- FIREcaller: an R package for detecting frequently interacting re-gions from Hi-C data☆13Nov 4, 2022Updated 3 years ago
- CliXO algorithm re-implemented☆16Nov 9, 2021Updated 4 years ago
- Cytoscape 3 implementation bundles.☆41Apr 14, 2026Updated 2 weeks ago
- Pathway-based trajectory inference method for time-series scRNAseq data☆25May 18, 2021Updated 4 years ago
- Vignettes for Population Genetics in R