Alternatives and similar repositories for genenetwork2

Users that are interested in genenetwork2 are comparing it to the libraries listed below

• ewels / clusterflow
  A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.
  ☆98Updated 2 years ago
• ChristofferFlensburg / superFreq
  Analysis pipeline for cancer sequencing data
  ☆110Updated 4 months ago
• ISCB-Academy / Elements-of-Style-Reproducible-Workflow-Creation-Maintenance-Tutorial
  ☆19Updated 3 years ago
• ncbi / ngs
  NGS Language Bindings
  ☆119Updated last year
• nunofonseca / irap
  integrated RNA-seq Analysis Pipeline
  ☆83Updated 6 years ago
• ncbi / ncbi-vdb
  ncbi-vdb
  ☆92Updated this week
• daler / metaseq
  Framework for integrated analysis and plotting of ChIP/RIP/RNA/*-seq data
  ☆87Updated 5 years ago
• broadinstitute / gtex-viz
  GTEx Visualizations
  ☆65Updated 4 years ago
• johandahlberg / awesome-10x-genomics
  List of tools and resources related to the 10x Genomics GEMCode/Chromium system
  ☆85Updated 6 years ago
• NCBI-Hackathons / SPeW
  Automatic Packaging and Distribution of Bioinformatics Pipelines
  ☆26Updated 7 years ago
• genepattern / genepattern-server
  The GenePattern Server web application
  ☆36Updated last month
• reiterlab / treeomics
  Decrypting somatic mutation patterns to reveal the evolution of cancer
  ☆56Updated 4 years ago
• pbnjay / lollipops
  This is the development fork - Stable code has been moved to ==>
  ☆25Updated 5 years ago
• cbg-ethz / NGS-pipe
  NGS-pipe: next-generation sequencing pipelines for precision oncology
  ☆114Updated 6 years ago
• lifebit-ai / DeepVariant
  Deep Variant as a Nextflow pipeline
  ☆30Updated 5 years ago
• thelovelab / tximport
  Transcript quantification import for modular pipelines
  ☆140Updated last month
• hartleys / QoRTs
  Quality of RNA-Seq Toolset
  ☆53Updated 6 years ago
• NCBI-Hackathons / Community_Software_Tools_for_NGS
  ☆63Updated 9 years ago
• gatk-workflows / seq-format-conversion
  Workflows for converting between sequence data formats
  ☆39Updated 4 years ago
• morrislab / phylowgs
  Application for inferring subclonal composition and evolution from whole-genome sequencing data.
  ☆112Updated 2 years ago
• biosql / biosql
  ☆91Updated 6 years ago
• sebriois / biomart
  Python biomart API
  ☆68Updated 2 years ago
• taylor-lab / hotspots
  Identifying recurrent mutations in cancer
  ☆38Updated 4 years ago
• Clinical-Genomics / BALSAMIC
  Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer
  ☆50Updated this week
• BD2KGenomics / toil-rnaseq
  UC Santa Cruz Computational Genomics Lab's Toil-based RNA-seq pipeline
  ☆41Updated 5 years ago
• ding-lab / hotspot3d
  3D hotspot mutation proximity analysis tool
  ☆48Updated 2 years ago
• boutroslab / cld
  A software for the multispecies design of CRISPR/Cas9 libraries
  ☆36Updated 2 years ago
• UMCUGenetics / RNASeq
  RNASeq pipeline
  ☆36Updated 5 years ago
• bcgsc / orca
  Genomics Research Container Architecture
  ☆48Updated 6 years ago
• s-andrews / SeqMonk
  SeqMonk NGS visualisation and analysis tool
  ☆49Updated this week