ialbert / booleannetLinks
Boolean Network Modeling
☆40Updated 5 years ago
Alternatives and similar repositories for booleannet
Users that are interested in booleannet are comparing it to the libraries listed below
Sorting:
- DCell browser and gene deletion simulator☆125Updated 2 years ago
- PyBoolNet is a Python package for the generation, modification and analysis of Boolean networks.☆49Updated 8 months ago
- Stochastic simulation of next-generation sequencing data from neutrally evolving tumors☆10Updated 8 years ago
- Yet Another Motif Discovery Algorithm☆53Updated 6 years ago
- Reproducible machine learning analysis of gene expression and alternative splicing data☆126Updated 2 years ago
- Denoising Autoencoders for Phenotype Stratification☆41Updated 6 years ago
- A project for exploring differentially active signaling paths related to proteomics datasets☆42Updated 2 weeks ago
- API providing access to papers and authors scraped from biorxiv.org☆57Updated 2 years ago
- Data Integration tool utilizing network information for predictive analyses☆16Updated 2 months ago
- CANAlization: Control & Redundancy in Boolean Networks☆24Updated 11 months ago
- Python Environment for Modeling and Simulating Biological Systems☆119Updated last week
- An object oriented python library for topological data analysis of high-throughput single-cell RNA-seq data☆51Updated 7 years ago
- pysster: Learning Sequence And Structure Motifs In Biological Sequences Using Convolutional Neural Networks☆86Updated 5 years ago
- Tools for building and manipulating graphs in Python☆41Updated 3 weeks ago
- Whole-cell modeling tutorials☆16Updated 5 years ago
- DeepMetabolism is a deep learning algorithm to predict phenotype from genome sequencing☆31Updated 8 years ago
- ☆13Updated last week
- GPU-accelerated multicellular modelling framework☆63Updated 2 months ago
- Graph regularized nonnegative matrix factorization (GNMF) in Python☆45Updated 5 years ago
- Python framework for Systems Biology modeling☆182Updated 4 months ago
- Standalone Python package containing libSBML with support for SBML Level 3 Core and accepted SBML Level 3 packages.☆23Updated 2 months ago
- The CoLoMoTo Interactive Notebook: Accessible and Reproducible Computational Analyses for Qualitative Biological Networks☆27Updated last week
- Target prioritization using network representation learning☆11Updated 3 years ago
- generalized principal component analysis (GLM-PCA) implemented in python☆60Updated 4 years ago
- An experimental deep learning & genotype network-based system for predicting new influenza protein sequences.☆37Updated last year
- A tool for creating Python implementations of SBML models.☆14Updated 2 years ago
- Causal and probabilistic reasoning with continuous time dynamical systems☆19Updated last week
- biotoolsSchema : Tool description data model for computational tools in life sciences☆38Updated last year
- Prediction of the 3D structure of the genome through statistically significant Hi-C contacts.☆21Updated 6 years ago
- Software for in silico evolution - Paul François' group McGill University☆10Updated 3 years ago