colabobio / ebola-predictorLinks
Prediction pipeline to generate prognosis predictors for Ebola Virus Disease
☆12Updated 9 years ago
Alternatives and similar repositories for ebola-predictor
Users that are interested in ebola-predictor are comparing it to the libraries listed below
Sorting:
- Inferring spatiotemporal dynamics of the H1N1 influenza pandemic from sequence data☆33Updated 12 years ago
- python stuff I use☆19Updated 6 years ago
- Virus metagenomic pipeline for unknown host or in absence of a host genome☆18Updated 6 years ago
- SVG based genome viewer written in javascript using D3☆33Updated 10 years ago
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 6 years ago
- A collection of well-known bioinformatics programs.☆25Updated 10 years ago
- variant discovery and annotation using GATK and Ensembl☆17Updated 12 years ago
- Curated collection of open-source bioinformatics tools☆28Updated 6 years ago
- Nanopore desc☆18Updated 9 years ago
- Efficient handling of FASTQ files from Python☆51Updated last month
- Scripts for creating a Kraken database from the Comprehensive Antibiotic Resistance Database☆10Updated 9 years ago
- ☆40Updated 9 years ago
- edit distance sequence tags and helpers☆12Updated 4 years ago
- localised duplicate detection on patterned flow cells☆10Updated 6 years ago
- Strain resolved metagenome simulator☆13Updated 7 years ago
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆34Updated last year
- Directly create a bigwig file with signal derived from a sorted and indexed bam file.☆11Updated 8 years ago
- A library for next generation genomics in Python 3☆18Updated 7 years ago
- Streaming sequence classification with web services ✓📌☆19Updated 3 years ago
- What's The Function of these genes?☆22Updated 8 years ago
- Please see https://github.com/chanzuckerberg/czid-workflows for the latest version of CZ ID workflows.☆27Updated 4 years ago
- Color DNA/RNA bases in terminal output☆21Updated 8 years ago
- Hominid: host-microbiome interaction identification☆16Updated last year
- FAstqc DAta PArser - A minimal parser to parse FastQC output data.☆16Updated 9 years ago
- Visualise interstrain recombination from environmental samples.☆26Updated 6 years ago
- Perform microbiome-wide association studies with a variety of models☆18Updated 8 years ago
- ☆18Updated 8 years ago
- robust matching of small variant datasets using flexible scoring schemes☆11Updated 5 years ago
- reference free variant assembly☆34Updated 2 years ago
- Stupid Simple Structural Variant View☆25Updated 9 years ago