clintval / genome-browserLinks
A lightweight Python graphing API for genomic features
☆15Updated 3 years ago
Alternatives and similar repositories for genome-browser
Users that are interested in genome-browser are comparing it to the libraries listed below
Sorting:
- Biological Graphic tool in Python☆34Updated 5 years ago
- Ococo: the first online variant and consensus caller. Call genomic consensus directly from an unsorted SAM/BAM stream.☆47Updated 6 years ago
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 5 years ago
- Efficient handling of FASTQ files from Python☆51Updated last week
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆51Updated 7 months ago
- Reference-free variant discovery in large eukaryotic genomes☆41Updated 4 years ago
- Stupid Simple Structural Variant View☆25Updated 8 years ago
- Nextflow workshop 2018 -- Training pages -> https://nextflow-io.github.io/nf-hack18/☆18Updated 6 years ago
- A fast, easy way to present complex bioinformatics pipelines to biologists☆11Updated 6 years ago
- robust matching of small variant datasets using flexible scoring schemes☆11Updated 5 years ago
- A C++ header-only library for reading Oxford Nanopore Fast5 files☆53Updated 3 years ago
- Intersect multiple VCF files with haplotype awareness☆25Updated 4 years ago
- http://www.combio.pl/alfree☆23Updated 3 years ago
- Malleable All-seeing Journal Of Research Artifacts☆36Updated 2 years ago
- ☆37Updated 3 months ago
- Samwell: a python package for using genomic files... well☆20Updated 3 years ago
- a wee tool for random access into BGZF files.☆85Updated 7 years ago
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆34Updated 7 months ago
- PacBio BAM C++ library☆21Updated last year
- ☆37Updated 4 years ago
- Build an index for your BAM Index (BAI)☆17Updated 10 years ago
- A utility for merging and genotyping Illumina-style GVCFs.☆33Updated 6 years ago
- List of computational resources for analyzing microbial sequencing data.☆68Updated last month
- filtering trio-based genetic variants in VCFs for clinical review☆21Updated 4 years ago
- a pileup library that embraces the huge☆43Updated 4 years ago
- Experimental getopt, gzip reader, FASTA/Q parser and interval queries in nim-lang☆32Updated 5 years ago
- A message queue for genomic surveillance☆20Updated 3 years ago
- pathoscore evaluates variant pathogenicity tools and scores.☆21Updated 3 years ago
- vgraph is a command line application and Python library to compare genetic variants using variant graphs. ``vgraph`` utilizes a graph re…☆43Updated 3 years ago
- Genome guided re-segmention and visualization for raw nanopore sequencing data.☆47Updated 6 years ago