Alternatives and similar repositories for shiny-iatlas:

Users that are interested in shiny-iatlas are comparing it to the libraries listed below

• jminnier / STARTapp
  The START App: R Shiny Transcriptome Analysis Resource Tool
  ☆90Updated 4 years ago
• lcolladotor / biocthis
  Automate package and project setup for Bioconductor packages
  ☆51Updated 3 months ago
• cmap / morpheus.R
  R interface to morpheus.js heatmap widget
  ☆38Updated 4 years ago
• waldronlab / MultiAssayExperiment
  Bioconductor package for management of multi-assay data
  ☆71Updated last month
• igordot / msigdbr
  MSigDB gene sets for multiple organisms in a tidy data format
  ☆72Updated last week
• Bioconductor / OrchestratingSingleCellAnalysis-release
  An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.
  ☆36Updated last year
• arnesmits / DEP
  DEP package
  ☆28Updated 2 years ago
• stemangiola / bioc_2020_tidytranscriptomics
  Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap
  ☆26Updated 4 years ago
• csoneson / ExploreModelMatrix
  Explore design matrices interactively with R/Shiny
  ☆37Updated 2 months ago
• stemangiola / tidySingleCellExperiment
  Brings SingleCellExperiment objects to the tidyverse
  ☆36Updated 2 months ago
• markrobinsonuzh / cytofWorkflow
  ☆16Updated 10 months ago
• federicomarini / GeneTonic
  Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail
  ☆77Updated this week
• yan-cri / DEApp
  DEAPP shiny App
  ☆30Updated 2 years ago
• anhtr / HPAanalyze
  A Bioconductor package to retrieve and analyze data from the Human Protein Atlas
  ☆34Updated last year
• stemangiola / tidySummarizedExperiment
  Brings SummarizedExperiment to the tidyverse
  ☆26Updated 9 months ago
• Bioconductor / basilisk
  Clone of the Bioconductor repository for the basilisk package.
  ☆27Updated last month
• isb-cgc / examples-R
  Analysis examples based on the ISB-CGC hosted TCGA data, using R and R Markdown.
  ☆31Updated 7 years ago
• jasdumas / shinyGEO
  Gene Expression Omnibus Analysis with Shiny
  ☆41Updated 2 years ago
• RGLab / ggcyto
  Visualize Cytometry data with ggplot2
  ☆58Updated last year
• ropensci / UCSCXenaTools
  An R package for accessing genomics data from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq https://cran.r-project.…
  ☆106Updated 4 months ago
• waldronlab / ProjectAsPackage
  Demonstration of the use of an R package to organize a data analysis project
  ☆21Updated 4 years ago
• leekgroup / networks_correction
  Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"
  ☆16Updated 5 years ago
• Bioconductor / BiocWorkshops2019
  The official repository of the Bioconductor 2019 Conference Workshops
  ☆25Updated last year
• RGLab / cytoverse
  collections of tools for cytometry data analysis
  ☆13Updated 4 years ago
• waldronlab / cBioPortalData
  Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment
  ☆33Updated last week
• Syksy / curatedPCaData
  Bioconductor R-package: Curated Prostate Cancer Data
  ☆10Updated 5 months ago
• federicomarini / pcaExplorer
  pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data
  ☆56Updated last week
• cytoscape / RCy3
  New version of RCy3, redesigned and collaboratively maintained by Cytoscape developer community
  ☆52Updated 4 months ago
• tgirke / systemPipeR
  Project Website:
  ☆53Updated 6 months ago
• KatrionaGoldmann / volcano3D
  An R package to plot interactive three-way differential expression analysis
  ☆36Updated last year