CRI-iAtlas / shiny-iatlasLinks
An interactive web portal for exploring immuno-oncology data. This repo now superseded by iatlas-app
☆49Updated 4 years ago
Alternatives and similar repositories for shiny-iatlas
Users that are interested in shiny-iatlas are comparing it to the libraries listed below
Sorting:
- An R package to plot interactive three-way differential expression analysis☆37Updated last year
- Brings SummarizedExperiment to the tidyverse☆26Updated last year
- Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap☆26Updated 4 years ago
- An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.☆36Updated 2 years ago
- Clone of the Bioconductor repository for the basilisk package.☆27Updated last month
- Bioconductor package for management of multi-assay data☆72Updated last month
- R interface to morpheus.js heatmap widget☆38Updated 4 years ago
- The START App: R Shiny Transcriptome Analysis Resource Tool☆90Updated 4 years ago
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated 2 years ago
- Explore design matrices interactively with R/Shiny☆37Updated 2 months ago
- Brings SingleCellExperiment objects to the tidyverse☆36Updated 6 months ago
- A Bioconductor package to retrieve and analyze data from the Human Protein Atlas☆36Updated 3 weeks ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆29Updated last month
- Visualise correlation results and test significancies of these☆23Updated 5 years ago
- Automate package and project setup for Bioconductor packages☆53Updated 3 months ago
- DEAPP shiny App☆30Updated 3 years ago
- Representation and manipulation of genomic intervals☆46Updated this week
- A Grammar of Data Manipulation for Omics Data☆21Updated 4 years ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/☆41Updated 6 months ago
- R package for querying the DrugBank database in batch locally☆37Updated 3 years ago
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆21Updated last year
- MSigDB gene sets for multiple organisms in a tidy data format☆79Updated last month
- Template for building a bioconductor workshop package using github actions☆20Updated 11 months ago
- Demonstration of the use of an R package to organize a data analysis project☆21Updated 5 years ago
- the manifesto, workshops and tutorials of the tidy transcriptomics☆13Updated last month
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆46Updated 7 months ago
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 4 years ago
- Functional enrichment analysis of high-throughput omics data☆20Updated 5 months ago
- See https://github.com/LTLA/SingleRBook for the latest version of this content.☆11Updated 3 years ago