🧬 Algorithms for DNA Sequencing by Johns Hopkins University
☆36Dec 7, 2023Updated 2 years ago
Alternatives and similar repositories for Algorithms-DNA-Sequencing
Users that are interested in Algorithms-DNA-Sequencing are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Coursera MOOC Algorithms for DNA Sequencing by Ben Langmead, PhD, Jacob Pritt☆13Nov 13, 2015Updated 10 years ago
- Codes from Coursera's course Algorithms for DNA sequencing, part of genomic data science specialization offered by Johns Hopkins Universi…☆24Aug 30, 2016Updated 9 years ago
- Slides for Algorithms for DNA Sequencing Coursera class☆363Sep 15, 2015Updated 10 years ago
- Chromosome Scale Assembler: A high-throughput chromosome scale genome assembly pipeline for vertebrate genomes☆10Oct 16, 2024Updated last year
- Parses and Plots Illumina SAV files☆13Jan 30, 2019Updated 7 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Motif Transformers for Predicting Protein-Protein Interactions Between a Novel Virus and Humans☆10Dec 4, 2024Updated last year
- BertSNR: an interpretable deep learning framework for single nucleotide resolution identification of transcription factor binding sites b…☆13May 27, 2025Updated 11 months ago
- Helpful handful of programs, completely open-source and free☆11Mar 26, 2021Updated 5 years ago
- ☆10Jul 15, 2016Updated 9 years ago
- Shiny app for scaling eggnog☆14Aug 9, 2024Updated last year
- PyTorch implementation of Basenji2.☆21Apr 29, 2025Updated last year
- ☆14Mar 18, 2016Updated 10 years ago
- Best practices for readable, sharable, and verifiable R code☆18Mar 26, 2019Updated 7 years ago
- A Shiny tool to define the cell-type of action by integrating single cell expression data with GWAS☆12Nov 1, 2018Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data☆30Oct 24, 2024Updated last year
- ☆27Sep 9, 2025Updated 7 months ago
- Evaluating genomic sequence models for explaining personalized expression variation☆20Dec 6, 2023Updated 2 years ago
- A introductory BioPython tutorial for Bioinformatics students☆18Oct 1, 2020Updated 5 years ago
- A pan-cancer genome-wide analysis reveals tumour dependencies by induction of nonsense-mediated decay☆15Nov 2, 2020Updated 5 years ago
- Mostly deprecated in favor of : https://github.com/hbc/bcbioRNASeq. Quality control, differential gene/transcript expression and pathway …☆26Dec 11, 2017Updated 8 years ago
- An analysis of Arabidopsis RNA-seq data (hy5 mutant and wt, two replicates each; SRA accession SRX029582)☆14Jul 3, 2012Updated 13 years ago
- Tool for demultiplexing Nanopore barcode sequence data☆25Mar 9, 2026Updated last month
- ☆33Feb 21, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A collection of scripts to run GWAS, regional, gene-oriented, or per-variant analyses.☆18Jan 21, 2026Updated 3 months ago
- CLIP Tool Kit (CTK)☆22Apr 28, 2024Updated 2 years ago
- ☆25Aug 20, 2024Updated last year
- Workflows for correcting and scaffolding long-read (PacBio, nanopore) genome assemblies using optical mapping and/or Dovetail Hi-C data☆20Aug 18, 2020Updated 5 years ago
- FreeBSD service daemon for KBFS, the Keybase filesystem☆13Jul 22, 2021Updated 4 years ago
- Software for measuring poly(A) tail length and 3′-end modifications using a high-throughput sequencer☆19Aug 18, 2023Updated 2 years ago
- ☆19Nov 16, 2018Updated 7 years ago
- some short but practical PERL script in NGS data analysis☆16Oct 30, 2017Updated 8 years ago
- Site to help biologists wade their way into bioinformatics.☆35Apr 7, 2026Updated 3 weeks ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- 采用开源论坛系统Flarum建设GATK中文社区，该论坛所有帖子将以markdown代码形式发帖，所有的markdown源代码都会同步存放在此github的organization的这个project下面。GATK中文社区地址是：https://www.gatk.com.…☆17Oct 21, 2017Updated 8 years ago
- MAGIC - imputation and de-noising single-cell RNA seq data sets☆27Sep 19, 2019Updated 6 years ago
- A simple centralized, cross-platform credential manager using GPG encryption.☆11May 7, 2018Updated 7 years ago
- The repository keeps the files for an IPython notebook on about how to make a simple genome assembler using python☆30May 10, 2018Updated 7 years ago
- The most advanced multisig bitcoin wallet optimized for collaboration.☆12Updated this week
- ☆13Jul 28, 2025Updated 9 months ago
- Pages saved with SingleFile☆13Mar 16, 2024Updated 2 years ago