A python project for analysis of codon usage for gene or genome analysis
☆28Nov 10, 2024Updated last year
Alternatives and similar repositories for CodonU
Users that are interested in CodonU are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python package of codon usage bias analysis tools☆23May 16, 2026Updated 5 months ago
- A genome alignment and visualization system☆10Apr 30, 2024Updated 2 years ago
- A python feature extraction and selection tool for DNA, RNA, Protein sequencing data☆10May 4, 2020Updated 6 years ago
- ☆11Apr 25, 2024Updated 2 years ago
- ☆12Dec 10, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆25Oct 16, 2024Updated 2 years ago
- Draw pan- and core-genome curves from proteinortho output☆14Oct 26, 2023Updated 3 years ago
- gtAI is a new package implemented in python to effectively estimate the tRNA adaptation index (tAI).☆11May 20, 2026Updated 5 months ago
- ViromeQC is a computational tool to benchmark and quantify non-viral contamination in VLP-enrihed viromes. ViromeQC provides an enrichmen…☆21Nov 15, 2022Updated 3 years ago
- This is a modified version of EDTA -- zgtools☆20Updated this week
- baltic - adaptable lightweight tree import code for molecular phylogeny manipulation, analysis and visualisation. This fork will no longe…☆12Dec 18, 2019Updated 6 years ago
- A small program that glues together other programs allowing a user to input a codon alignment in FASTA format and produce an annotated ph…☆19Jan 14, 2015Updated 11 years ago
- High-quality circular representations of taxonomic and phylogenetic trees☆112Aug 7, 2024Updated 2 years ago
- Umbrella documentation project for Nextstrain☆18Updated this week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A collection of M models downloaded from published studies☆18Feb 18, 2016Updated 10 years ago
- A software tool for personalized and allele-specific CRISPR editing.☆18Feb 1, 2022Updated 4 years ago
- 教你用R语言绘制好看的发表级图表☆27Dec 31, 2024Updated last year
- ☆30May 15, 2023Updated 3 years ago
- R for Data Science (2e) in Simplified Chinese☆28Mar 15, 2026Updated 7 months ago
- ☆10Nov 20, 2025Updated 11 months ago
- Reanalysis of the repressive capacity of promoter DNA methylation☆11Feb 14, 2019Updated 7 years ago
- LinearDisplay.pl is a program that generates publication quality linear maps of user-defined genetic features (e.g., ORFs, promoters, tra…☆10Apr 2, 2025Updated last year
- ☆21Oct 27, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Trias: an encoder-decoder model for generating synthetic eukaryotic mRNA sequences☆14Apr 28, 2026Updated 6 months ago
- Bayesian molecular clock dating tutorial with genome-scale datasets☆19Dec 4, 2021Updated 4 years ago
- Database of virus RdRP barcode sequences☆16Jul 5, 2024Updated 2 years ago
- collection of random scripts for processing genome related files. the shell scripts are specific to my environment and may not work else…☆10Jul 19, 2018Updated 8 years ago
- ☆10Mar 3, 2022Updated 4 years ago
- All codes associated with MendelPeaG2P project☆13Mar 5, 2025Updated last year
- Grapevine pangenome facilitates trait genetics and genomic breeding☆10May 8, 2024Updated 2 years ago
- MayaChemTools is a growing collection of Perl and Python scripts, modules, and classes to support a variety of day-to-day computational d…☆10Sep 1, 2020Updated 6 years ago
- Generating Protein Variants with Different Generative Models (HMM, VAE, ESM-2, ProtGPT2)☆11Mar 14, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Code for running Illumina Library Prep on Hamilton STARlet with PyLabRobot, originally built for in-house use at Pioneer Labs (Emeryville…☆11Apr 2, 2026Updated 7 months ago
- ☆10Jan 15, 2025Updated last year
- Web-based bioinformatics software for correlating genome-wide DNA methylation and gene expression☆12Jan 17, 2021Updated 5 years ago
- ☆10Dec 6, 2022Updated 3 years ago
- Python toolkit for LC-MS/MS Proteomics analysis based on MuData☆15Updated this week
- Automancer is a software application that enables researchers to design, automate, and manage their experiments.☆27Jul 26, 2023Updated 3 years ago
- A biological dual-language foundation model☆11Jun 16, 2025Updated last year