A python project for analysis of codon usage for gene or genome analysis
☆28Nov 10, 2024Updated last year
Alternatives and similar repositories for CodonU
Users that are interested in CodonU are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python package of codon usage bias analysis tools☆22May 16, 2026Updated 4 months ago
- ☆12Dec 10, 2024Updated last year
- Pipeline for metagenomic community analysis using DNA isolated from virus-like particles☆13Mar 21, 2020Updated 6 years ago
- ViromeQC is a computational tool to benchmark and quantify non-viral contamination in VLP-enrihed viromes. ViromeQC provides an enrichmen…☆21Nov 15, 2022Updated 3 years ago
- High-quality circular representations of taxonomic and phylogenetic trees☆112Aug 7, 2024Updated 2 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- A small program that glues together other programs allowing a user to input a codon alignment in FASTA format and produce an annotated ph…☆19Jan 14, 2015Updated 11 years ago
- A collection of M models downloaded from published studies☆18Feb 18, 2016Updated 10 years ago
- 教你用R语言绘制好看的发表级图表☆27Dec 31, 2024Updated last year
- A software tool for personalized and allele-specific CRISPR editing.☆18Feb 1, 2022Updated 4 years ago
- Umbrella documentation project for Nextstrain☆18Aug 18, 2026Updated last month
- ☆30May 15, 2023Updated 3 years ago
- Reanalysis of the repressive capacity of promoter DNA methylation☆11Feb 14, 2019Updated 7 years ago
- ☆10Sep 4, 2024Updated 2 years ago
- ☆21Oct 27, 2023Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- MayaChemTools is a growing collection of Perl and Python scripts, modules, and classes to support a variety of day-to-day computational d…☆10Sep 1, 2020Updated 6 years ago
- Database of virus RdRP barcode sequences☆16Jul 5, 2024Updated 2 years ago
- A containerized bioinformatics pipeline for viral metagenomic data analysis☆41Sep 20, 2026Updated last week
- Data repository for pkasolver☆13Mar 28, 2022Updated 4 years ago
- Bayesian molecular clock dating tutorial with genome-scale datasets☆19Dec 4, 2021Updated 4 years ago
- ☆25Dec 20, 2022Updated 3 years ago
- Automancer is a software application that enables researchers to design, automate, and manage their experiments.☆27Jul 26, 2023Updated 3 years ago
- Generating Protein Variants with Different Generative Models (HMM, VAE, ESM-2, ProtGPT2)☆11Mar 14, 2024Updated 2 years ago
- A biological dual-language foundation model☆11Jun 16, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- T2Tools is a toolset contains several tools for T2T assembly, and it is under development.☆17Sep 17, 2025Updated last year
- Data and workflow examples☆16Apr 9, 2018Updated 8 years ago
- ☆14Dec 10, 2018Updated 7 years ago
- AIRFold Protein Structure Prediction System☆13Mar 24, 2025Updated last year
- A tool for plotting CAFE5 gene family expansion/contraction result☆37Sep 22, 2023Updated 3 years ago
- ☆18Nov 26, 2023Updated 2 years ago
- ☆16Mar 1, 2026Updated 6 months ago
- Murine version of MCP-counter, a tool to estimate the immune and stromal composition of heterogeneous tissue, from transcriptomic data☆12Jun 30, 2022Updated 4 years ago
- Assessing the quality of prokaryotic genomes, filtering and dereplication☆11Aug 26, 2022Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Structural Variant Prediction Viewer☆36Jul 19, 2017Updated 9 years ago
- Conversion software tool for producing both annotation and tree files for GraPhlAn☆11Feb 2, 2022Updated 4 years ago
- QLoRA for Masked Language Modeling☆23Sep 11, 2023Updated 3 years ago
- Python toolkit and package for analyzing enzyme activity data☆12Jun 17, 2022Updated 4 years ago
- FastViromeExplorer project. Forked from https://code.vt.edu/saima5/FastViromeExplorer☆15Jul 2, 2019Updated 7 years ago
- Osmosis is a command line Java application for processing OSM data.☆11Sep 28, 2020Updated 5 years ago
- The official repository for the ARSENAL model☆20Jul 3, 2026Updated 2 months ago