stanfordmlgroup / DLBCL-Morph
DLBCL-Morph dataset containing high resolution tissue microarray scans from 209 DLBCL cases, with geometric features computed using deep learning
☆36Updated 4 years ago
Alternatives and similar repositories for DLBCL-Morph:
Users that are interested in DLBCL-Morph are comparing it to the libraries listed below
- Python 3 library for the augmentation & normalization of H&E images☆54Updated 2 years ago
- Pipeline for computational pathology☆35Updated last year
- A neural network software for using Molecular labelling to improve pathological annotation of H and E tissues☆31Updated 3 months ago
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆54Updated last year
- A tutorial demonstration of pathml on an example dataset for the manuscript "PathML: A unified framework for WSI analysis with deep learn…☆23Updated 3 years ago
- Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine☆31Updated 2 years ago
- A Python library for deep learning on whole-slide images☆51Updated 3 years ago
- ☆44Updated 2 years ago
- Data and code to accompany our Nature publication☆46Updated 3 years ago
- Official code for the paper "A Good Feature Extractor Is All You Need for Weakly Supervised Pathology Slide Classification"☆18Updated 8 months ago
- A pipeline to segment tissue from the background in histological images☆69Updated 2 years ago
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆32Updated last year
- Bayesian Inference of Slide-level Confidence via Uncertainty Index Thresholding☆28Updated 8 months ago
- Preprocessing module for large histological images☆20Updated last year
- NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation☆54Updated 3 years ago
- A set of codes to classify H&E slides using deep learning☆30Updated 3 years ago
- Re-stained whole slide image alignment☆33Updated last year
- Interactive deep learning whole-cell segmentation and thresholding using partial annotations☆39Updated 3 weeks ago
- Topological Feature Extraction on Whole Slide Images using Graph Neural Networks.☆23Updated 4 years ago
- This repository contains the implementation of TILAb-score as described in the original paper.☆18Updated 5 years ago
- Histopathology Image Analysis☆92Updated last year
- ☆20Updated 2 years ago
- ☆40Updated 3 years ago
- ☆55Updated 3 years ago
- [The Lancet Digital Health, MICCAI2020 Oral] The official code of "Spatially-aware Graph Neural Networks and Cross-level Molecular Profil…☆26Updated last year
- Code from Foersch et al. (Under Construction / Development)☆36Updated last year
- NuInsSeg: A Fully Annotated Dataset for Nuclei Instance Segmentation in H&E-Stained Histological Images☆33Updated 9 months ago
- Pretrained model for self supervised histopathology☆112Updated 2 years ago
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆67Updated 2 years ago
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆98Updated 3 months ago