chenying2016 / queriesLinks
hs-blastn, a fast and accurate nucleotide-nucleotide sequences aligner.
☆26Updated 4 years ago
Alternatives and similar repositories for queries
Users that are interested in queries are comparing it to the libraries listed below
Sorting:
- This repository is deprecated, please use the link to the right.☆23Updated 6 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 5 years ago
- Haplotype-aware genome assembly toolkit☆29Updated 5 years ago
- URMAP ultra-fast read mapper☆39Updated 4 years ago
- MarginPolish: Graph based assembly polishing☆46Updated 4 years ago
- Pan-Genomic Matching Statistics☆52Updated last year
- A simple tool to fix PacBio fasta/q that was not properly split into subreads☆15Updated 3 years ago
- Scripts for implementing read until and other examples.☆31Updated 5 years ago
- Adapter trimming and virtual library creation for Illumina Nextera Mate Pair libraries.☆54Updated 7 years ago
- Find Unique genomic Regions☆29Updated 2 months ago
- Minor Variant Calling and Phasing Tools☆15Updated 3 years ago
- An easy way to run BioNano genomic analysis☆27Updated 4 years ago
- My experimental tools on top of htslib. NOT OFFICIAL!!!☆55Updated last year
- Pipeline for scaffolding and breaking a genome assembly using 10x genomics linked-reads☆22Updated 2 years ago
- Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files.☆37Updated 2 years ago
- mBin: a methylation-based binning framework for metagenomic SMRT sequencing reads☆25Updated 2 years ago
- Exact Tandem Repeat Finder (not a TRF replacement)☆49Updated 5 years ago
- Scalable long read self-correction and assembly polishing with multiple sequence alignment☆55Updated last year
- INC-Seq: Accurate single molecule reads using nanopore sequencing☆15Updated 4 years ago
- NaS is a hybrid approach developped to take advantage of data generated using MinION device. We combine Illumina and Oxford Nanopore tech…☆15Updated 8 years ago
- ☆34Updated 5 years ago
- Making diploid assembly becomes common practice for genomic study☆30Updated 7 years ago
- Scaffolding genomes using synthetic long read clouds☆20Updated 8 years ago
- A tool to reduce the size of Oxford Nanopore Technologies' datasets without losing information☆31Updated last year
- Improved Phased Assembler☆28Updated 3 years ago
- Tools for detecting DNA modifications from single molecule, real-time sequencing data☆24Updated 3 years ago
- Symmetric DUST for finding low-complexity regions in DNA sequences☆42Updated last year
- program for haplotype phasing from sequence reads and related tools☆25Updated 6 years ago
- ☆26Updated 5 years ago
- Long read alignment analysis. Generate a reports on sequence alignments for mappability vs read sizes, error patterns, annotations and r…☆47Updated 6 years ago