☆52Jun 19, 2024Updated last year
Alternatives and similar repositories for protein-backbone-MCTS
Users that are interested in protein-backbone-MCTS are comparing it to the libraries listed below
Sorting:
- protein docking stuff☆52Sep 2, 2024Updated last year
- ☆37Dec 21, 2023Updated 2 years ago
- In-silico design pipeline for evaluating protein structure diffusion models.☆29Jun 25, 2024Updated last year
- ☆11Apr 21, 2023Updated 2 years ago
- Protein Origami via Genetic Fusions☆17Sep 19, 2022Updated 3 years ago
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Oct 27, 2021Updated 4 years ago
- Code for RL-DIF☆16Jun 24, 2025Updated 8 months ago
- Parametric Building of de novo Functional Topologies☆44Mar 11, 2022Updated 3 years ago
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆188Jun 24, 2024Updated last year
- Code and software used to design de novo protein nanomachines. Supplementary material for "Computational design of nanoscale rotational m…☆10Mar 19, 2022Updated 3 years ago
- Explore protein fold space with deep generative models☆16Aug 5, 2024Updated last year
- Structure-conditioned masked language modeling for protein sequence design☆71Jan 31, 2024Updated 2 years ago
- Generative diverse protein backbones by protein language model☆34Feb 27, 2026Updated last week
- Code and data used in https://doi.org/10.1101/2021.08.01.454656☆54May 2, 2022Updated 3 years ago
- ☆10Feb 3, 2026Updated last month
- Conditioning diffusion models for scaffolding protein motifs. A repository for my master's dissertation.☆12Dec 10, 2024Updated last year
- ☆61Apr 9, 2024Updated last year
- ☆11Mar 9, 2024Updated 2 years ago
- ☆15Sep 29, 2025Updated 5 months ago
- ☆146Jul 16, 2025Updated 7 months ago
- ☆24May 19, 2025Updated 9 months ago
- Some scripts that I keep using over and over.☆21Jul 5, 2025Updated 8 months ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆137Nov 11, 2025Updated 3 months ago
- Building more accurate protein structures from backbone torsion angles☆14Mar 21, 2025Updated 11 months ago
- A simple but powerful VSCode extension for visualizing protein structures using the Molstar framework.☆34Oct 17, 2025Updated 4 months ago
- ☆15Mar 28, 2025Updated 11 months ago
- Implementation of Protein Invariant Point Packer (PIPPack)☆35May 28, 2024Updated last year
- Template-based protein design with Raygun☆77Feb 7, 2026Updated last month
- ☆551Feb 6, 2025Updated last year
- ☆390Aug 7, 2024Updated last year
- De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds☆186Apr 21, 2024Updated last year
- Utility scripts to generate and evaluate parametrically guided beta barrel protein backbone structures.☆14Nov 14, 2025Updated 3 months ago
- Rifdock Library for Conformational Search☆166May 16, 2024Updated last year
- Fast protein backbone generation with SE(3) flow matching.☆315Jul 19, 2024Updated last year
- A computational method to optimize degenerate codons for synthesizing an informed combinatorial mutagenesis protein variant library☆17Feb 18, 2025Updated last year
- ☆20Aug 25, 2025Updated 6 months ago
- Gibbs sampling for generating protein sequences☆58Jan 17, 2025Updated last year
- An accurate and efficient protein sequence design approach☆27Mar 16, 2025Updated 11 months ago
- ☆96Oct 14, 2025Updated 4 months ago