VariantEffect / MaveReferences
Table of Multiplexed Assay of Variant Effect (MAVE) studies
☆11Updated 2 years ago
Alternatives and similar repositories for MaveReferences:
Users that are interested in MaveReferences are comparing it to the libraries listed below
- MAVE-NN: genotype-phenotype maps from multiplex assays of variant effect☆25Updated last month
- Package to Score Sequences using Rule Set 3☆11Updated last year
- Deep learning model to predict degron sequences☆19Updated 2 years ago
- An error model and pipeline for analyzing deep mutational scanning (DMS) data and diagnosing common experimental pathologies☆30Updated last week
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆37Updated last week
- ☆37Updated last year
- ☆14Updated 8 years ago
- A python library for creating simulated regulatory DNA sequences☆38Updated 2 years ago
- An RNA manipulation library.☆54Updated last year
- ERGO is a deep learing based model for predicting TCR-peptide binding.☆17Updated 2 years ago
- HLA-I ligand predictor☆33Updated 2 months ago
- ☆65Updated 2 weeks ago
- B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction☆58Updated this week
- Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.☆24Updated last year
- HLA-II ligand predictor.☆41Updated last year
- A bioinformatics best-practice analysis pipeline for epitope prediction and annotation☆42Updated 2 weeks ago
- Detects hotspot regions for somatic mutations in 3D protein structures☆2Updated last year
- Python package and command line tool for epitope prediction☆51Updated 7 months ago
- Comprehensive Python client for the Uniprot REST API☆46Updated 6 months ago
- IGoR is a C++ software designed to infer V(D)J recombination related processes from sequencing data. Find full documentation at:☆51Updated 2 years ago
- ScanFold is an RNA sequence scanning pipeline which attempts to identify potentially functional RNA secondary structures. This is done by…☆17Updated 2 years ago
- Draw RNA secondary structures in python.☆47Updated 6 months ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 2 years ago
- ClinVar Mapping and Annotation Toolkit☆19Updated last week
- A specification and Python implementation for representing variants from Multiplexed Assays of Variant Effect.☆11Updated 3 months ago
- Tool for deep mutational scanning experiments.☆48Updated this week
- predicting peptide and TCR interaction☆20Updated 4 years ago
- Python biomart API☆65Updated last year
- Comparison of Adaptive Immune Receptor Repertoires☆26Updated last month
- Predicting the impact of mutations on kinase–substrate phosphorylation☆10Updated last year