Table of Multiplexed Assay of Variant Effect (MAVE) studies
☆11Feb 21, 2023Updated 3 years ago
Alternatives and similar repositories for MaveReferences
Users that are interested in MaveReferences are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- MAVE-NN: genotype-phenotype maps from multiplex assays of variant effect☆31May 11, 2026Updated 5 months ago
- Interview hacks, programming interviews, take-home interviews, programming challenges, etc.☆12Dec 8, 2024Updated last year
- Debarcer: A package for De-Barcoding and Error Correction of sequencing data containing molecular barcodes☆15Apr 28, 2021Updated 5 years ago
- Source code for fitting thermodynamic models (MoCHI), downstream analyses and to reproduce all figures in the following publication: Mapp…☆21Jul 20, 2023Updated 3 years ago
- Create NNN primers tiling codons of a gene for codon mutagenesis☆14Jan 13, 2021Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Predicting the impact of mutations on kinase–substrate phosphorylation☆10Apr 12, 2023Updated 3 years ago
- Jupyter notebook for the application of convolutional neural nets to toy DNA sequence data☆15Aug 25, 2021Updated 5 years ago
- MaveDB API☆19Updated this week
- Code for "Single cell transcriptomes from human kidneys reveal the cellular identity of renal tumours"☆27Jun 5, 2018Updated 8 years ago
- Tutorial for using the perturbseq library to load and manipulate experiments☆26Aug 7, 2019Updated 7 years ago
- Code implementation of our ICLR'21 paper "Calibration of Neural Networks using Splines"☆21Mar 31, 2023Updated 3 years ago
- Autoencoder Demo for Fresh Machine Learning #5☆18Apr 24, 2020Updated 6 years ago
- Collections of transcription factor binding motifs for the software suite Regulatory Sequence Analysis Tools (RSAT)☆11May 16, 2026Updated 5 months ago
- Useful functions for manipulating Multiplex Assay of Variant Effect datasets.☆11Feb 6, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Public issue tracker for the Ultorg Desktop application☆14Jan 19, 2023Updated 3 years ago
- Identify cell barcodes from single-cell genomics sequencing experiments☆42Dec 14, 2021Updated 4 years ago
- Hadoop integration code for working with with Apache cTAKES☆10Feb 11, 2014Updated 12 years ago
- Bayesian analysis of MPRA and other high-throughput genomic assays☆10Jul 27, 2020Updated 6 years ago
- DCP Expression Matrix Service☆12Feb 15, 2026Updated 8 months ago
- Integrate the GA4GH schemas and probably a scala impl of the service.☆14May 20, 2016Updated 10 years ago
- SNp Exploration and Analysis using EPigenomics data☆12Oct 15, 2026Updated 2 weeks ago
- Scripts for making Hadoop deployments in AWS easy☆10Feb 26, 2014Updated 12 years ago
- A Nextflow pipeline to align, merge, and organize large PhIP-Seq datasets☆13Feb 7, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Code to build models that effectively predict promoter-driven gene expression☆13May 15, 2025Updated last year
- Interpretable bimodal network for transcription factors binding site prediction☆10Jun 29, 2023Updated 3 years ago
- DeepRegFinder is a deep learning based program used to identify DNA regulatory elements using ChIP-seq☆12Mar 28, 2024Updated 2 years ago
- Fast, efficient tool for analysis of T cell receptor repertoires (OLD VERSION)☆11Jun 20, 2017Updated 9 years ago
- Tensorflow implementation of equation learner☆34Jan 10, 2021Updated 5 years ago
- Sequence data label generation and ingestion into deep learning models☆12Nov 17, 2021Updated 4 years ago
- Scripts from the Joung et al Nature Protocols 2016 manuscript on knockout and transcriptional activation screening☆55Aug 30, 2017Updated 9 years ago
- Cloud-scale differential expression for RNA-seq☆15May 23, 2023Updated 3 years ago
- Implementation of Evolutionary and Metropolis Hastings Monte Carlo for text based (e.g. nucleotide/peptide) sequences☆13Mar 7, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Bayesian enrichment estimation in R☆11Nov 15, 2025Updated 11 months ago
- A Python-based parser, command line tool, related utilities, and sample blood pressure & weight GUI apps for OMHE Microsyntax☆13May 10, 2016Updated 10 years ago
- AntiRef: reference clusters of human antibody sequences☆12Apr 18, 2024Updated 2 years ago
- Codebase for the domain adaptation (cross-species TF binding prediction) project.☆12Aug 29, 2022Updated 4 years ago
- Parallel Genomic Analysis Toolkit☆14Feb 11, 2019Updated 7 years ago
- Pre-packaged plots in R☆84Sep 13, 2025Updated last year
- Python program, based on Prody, for pathogenicity prediction of human missense variants☆10Jun 29, 2021Updated 5 years ago