VariantEffect / MaveReferencesLinks
Table of Multiplexed Assay of Variant Effect (MAVE) studies
☆11Updated 2 years ago
Alternatives and similar repositories for MaveReferences
Users that are interested in MaveReferences are comparing it to the libraries listed below
Sorting:
- MAVE-NN: genotype-phenotype maps from multiplex assays of variant effect☆27Updated this week
- predicting peptide and TCR interaction☆20Updated 4 years ago
- Package to Score Sequences using Rule Set 3☆11Updated last year
- ERGO is a deep learing based model for predicting TCR-peptide binding.☆17Updated 2 years ago
- ☆19Updated 2 months ago
- ☆38Updated last year
- Comparison of Adaptive Immune Receptor Repertoires☆27Updated 4 months ago
- Detects hotspot regions for somatic mutations in 3D protein structures☆2Updated last year
- HLA-II ligand predictor.☆43Updated 2 years ago
- HLA-I ligand predictor☆39Updated 5 months ago
- Deep learning model to predict degron sequences☆20Updated 2 years ago
- MHC Class I and Class II neoantigen binding prediction☆29Updated 2 years ago
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Updated 3 years ago
- B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction☆58Updated 2 weeks ago
- Python interface to amino acid properties and IEDB☆56Updated 7 months ago
- A novel PSSM based software for predicting class I peptide-HLA binding affinity☆17Updated 8 years ago
- ☆10Updated 4 years ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 2 years ago
- TCRconv is a deep learning model for predicting recognition between T cell receptors and epitopes. It uses protBERT embeddings for the TC…☆25Updated 2 years ago
- An error model and pipeline for analyzing deep mutational scanning (DMS) data and diagnosing common experimental pathologies☆32Updated last month
- ERGO-II, an updated version of ERGO including more features for TCR-peptide binding prediction☆32Updated 3 years ago
- Repository for code for mapping sequence data to structural datasets.☆8Updated 6 years ago
- Code and data used in The Great Repertoire Project☆30Updated 3 years ago
- VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.☆42Updated 2 weeks ago
- Python-based framework for computational immunomics☆13Updated last year
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆38Updated this week
- ClinVar Mapping and Annotation Toolkit☆19Updated 2 weeks ago
- Modeling of human 5′ UTRs enables the design of new sequences for target levels of translation and 5′ UTR variant prediction.☆47Updated 5 years ago
- T cell Receptor and B cell Receptor assembly from single cell RNA sequencing data☆10Updated 7 years ago
- "Global Importance Analysis: A Method to Quantify Importance of Genomic Features in Deep Neural Networks" by Koo et al.☆13Updated 2 years ago