GPU-based 3D non-rigid volumetric registration
☆49Aug 26, 2025Updated 11 months ago
Alternatives and similar repositories for warpfield
Users that are interested in warpfield are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A Python toolbox for aligning / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆124Updated this week
- Visualise brainreg registration output☆10Nov 20, 2021Updated 4 years ago
- Build unbiased anatomical templates from individual images☆13Jul 14, 2026Updated last week
- ngio is a Python library to streamline OME-Zarr image analysis workflows.☆50Jul 10, 2026Updated 2 weeks ago
- Loading and saving of image data.☆10Feb 9, 2024Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Read and write files from the BrainGlobe neuroanatomy suite☆15Jul 14, 2026Updated last week
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Nov 26, 2020Updated 5 years ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆19Updated this week
- A napari plugin to render BrainGlobe atlases and associated data as layers.☆24Updated this week
- Modern Bio-Formats wrapper with clean lazy Python API☆23Jun 25, 2026Updated last month
- A pipeline built on napari that enables segmentation, detection, and tracking of animals in behavioral setups.☆17Jul 19, 2026Updated last week
- General information, resources and dicussions for the BrainGlobe project.☆11Feb 21, 2025Updated last year
- NIU website on common software problems and their troubleshooting☆10Jul 14, 2026Updated last week
- ☆10Mar 15, 2023Updated 3 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Automated 3D brain registration in napari with support for multiple species and atlases.☆16Jan 5, 2024Updated 2 years ago
- Reference implementation of the Graph Exchange File Format☆42Updated this week
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆56Nov 13, 2025Updated 8 months ago
- A minimal Python package for reading, writing and validating OME-Zarr (meta)data☆39Updated this week
- Standalone cellfinder cell detection algorithm☆20Jan 3, 2024Updated 2 years ago
- Anatomical space conventions made easy.☆12Jul 14, 2026Updated last week
- Efficient cell detection in large images using cellfinder in napari☆22Jan 5, 2024Updated 2 years ago
- ☆11Oct 21, 2025Updated 9 months ago
- Registration to BrainGlobe atlases in napari using Elastix☆30Jul 16, 2026Updated last week
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- An introduction to OME-Zarr for big bioimaging data☆27Jul 1, 2026Updated 3 weeks ago
- Tools for distributed alignment of massive images☆95Updated this week
- A repository for our participation in Google Summer of Code☆13Apr 15, 2025Updated last year
- A Python package to download neuronal morphologies☆17Jul 14, 2026Updated last week
- Re-usable GitHub Action scripts☆14Updated this week
- A multi-dimensional spatial image data structure for scientific Python.☆44Aug 8, 2025Updated 11 months ago
- Block-wise operations for large nD volumes☆45Updated this week
- Official implementation of MuViT (CVPR 2026), a ViT-based architecture for multi-scale modelling of gigapixel microscopy images.☆42Jun 7, 2026Updated last month
- High quality visualization for volumetric image data☆62Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A flexible Python-based GUI for stereotaxic experiment planning.☆13Feb 4, 2026Updated 5 months ago
- Derotate images acquired via multiphoton calcium imaging☆17Jul 6, 2026Updated 2 weeks ago
- Fancier logging with python.☆16Jul 6, 2026Updated 2 weeks ago
- Lightweight data specification for systems neuroscience, inspired by BIDS.☆23Jul 14, 2026Updated last week
- Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data☆21May 11, 2026Updated 2 months ago
- Pydantic models for OME-NGFF☆24Sep 14, 2025Updated 10 months ago
- A writer and reader for NGFF OME-Zarr datasets☆14Nov 2, 2021Updated 4 years ago