yuanlong-o / Deep_widefield_cal_infereceLinks
☆12Updated 2 years ago
Alternatives and similar repositories for Deep_widefield_cal_inferece
Users that are interested in Deep_widefield_cal_inferece are comparing it to the libraries listed below
Sorting:
- Pre-processing pipeline for widefield data☆12Updated 5 years ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆57Updated 2 years ago
- ☆13Updated last year
- spike extraction from calcium signals (Deneux et al., 2016)☆34Updated 5 years ago
- Matlab routines for online non-rigid motion correction of calcium imaging data☆153Updated 3 years ago
- DeepCAD-RT: Real-time denoising of fluorescence time-lapse imaging using deep self-supervised learning☆126Updated 8 months ago
- Tools to process widefield data☆12Updated 4 years ago
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆83Updated last year
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆99Updated last year
- Denoising and Demixing Pipeline for in vivo Voltage Imaging Data (SGPMD-NMF)☆15Updated 2 years ago
- Complete Matlab pipeline for large scale calcium imaging data analysis☆259Updated 2 years ago
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆65Updated last year
- Serial-section automated anatomy extension for ScanImage☆17Updated this week
- Constrained Nonnegative Matrix Factorization for microEndoscopic data☆151Updated last year
- Calcium Data Extraction and Analysis☆49Updated 3 years ago
- miniscope analysis pipeline with interactive visualizations☆98Updated last year
- a visualization method for neural data☆241Updated 9 months ago
- Extract regions of interest based on correlated pixel intensity☆24Updated 8 years ago
- Match suite2p ROIs between imaging sessions☆28Updated 6 years ago
- Control and design of two-photon photostimulation experiments☆17Updated 2 years ago
- Single photon tools for Neuroscience☆36Updated 3 months ago
- pipeline for volumetric cell segmentation☆13Updated last week
- Tools to work with Allen Inst CCF data in matlab☆144Updated 6 months ago
- Tools to register histological section images and cell count locations to mouse brain atlas☆28Updated 3 years ago
- A GUI and library for doing multi-fiber photometry☆18Updated 8 years ago
- Tools for processing 2P recordings☆131Updated 2 years ago
- Seeded Iterative Demixing (SID) of neuronal activity recordings made using Light Field Microscopy (LFM)☆28Updated 5 years ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆158Updated 2 weeks ago
- SpikeGLX recording system GUI [Neuropixels NI]☆101Updated last week
- Pytorch implementation of LocaNMF☆36Updated 5 years ago