yuanlong-o / Deep_widefield_cal_infereceLinks
☆12Updated 2 years ago
Alternatives and similar repositories for Deep_widefield_cal_inferece
Users that are interested in Deep_widefield_cal_inferece are comparing it to the libraries listed below
Sorting:
- Pre-processing pipeline for widefield data☆12Updated 5 years ago
- ☆13Updated last year
- Matlab routines for online non-rigid motion correction of calcium imaging data☆153Updated 3 years ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆55Updated 2 years ago
- spike extraction from calcium signals (Deneux et al., 2016)☆32Updated 5 years ago
- DeepCAD-RT: Real-time denoising of fluorescence time-lapse imaging using deep self-supervised learning☆124Updated 6 months ago
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆82Updated last year
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆63Updated last year
- Tools to process widefield data☆12Updated 4 years ago
- Denoising and Demixing Pipeline for in vivo Voltage Imaging Data (SGPMD-NMF)☆15Updated 2 years ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆99Updated last year
- Constrained Nonnegative Matrix Factorization for microEndoscopic data☆148Updated last year
- a visualization method for neural data☆239Updated 8 months ago
- Registration of cells across sessions.☆75Updated last year
- Complete Matlab pipeline for large scale calcium imaging data analysis☆259Updated 2 years ago
- Calcium Data Extraction and Analysis☆48Updated 3 years ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆157Updated 3 weeks ago
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago
- Seeded Iterative Demixing (SID) of neuronal activity recordings made using Light Field Microscopy (LFM)☆28Updated 5 years ago
- Control and design of two-photon photostimulation experiments☆17Updated last year
- miniscope analysis pipeline with interactive visualizations☆96Updated last year
- Tools to work with Allen Inst CCF data in matlab☆143Updated 4 months ago
- Parameter-free statistical testing package☆11Updated last week
- Accurate denoising of voltage imaging data through statistically unbiased prediction, Nature Methods.☆94Updated 4 months ago
- ☆41Updated 4 years ago
- Serial-section automated anatomy extension for ScanImage☆17Updated last month
- Extract regions of interest based on correlated pixel intensity☆24Updated 8 years ago
- Large field-of-view miniature microscope for rats and larger animals.☆17Updated 2 years ago
- SpikeGLX recording system GUI [Neuropixels NI]☆99Updated last week
- visual display and analysis python code for retinotopic mapping of rodent visual cortex☆20Updated last year