mpriessner / CAFI
Combined Repos from DAIN and Zooming SlowMo
☆20Updated last year
Alternatives and similar repositories for CAFI:
Users that are interested in CAFI are comparing it to the libraries listed below
- ☆20Updated last year
- Three-dimensional residual channel attention networks☆52Updated 2 years ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated 2 months ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆39Updated 2 weeks ago
- MSSR Plugin☆13Updated 6 months ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆26Updated this week
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆41Updated 6 months ago
- A Python software library with a variety of functions for (optical) microscopy image restoration, reconstruction and analysis.☆77Updated 3 years ago
- Adaptive Optics plugin for MicroManager☆12Updated 2 years ago
- A napari plugin for clustering objects according to their properties.☆84Updated this week
- Nanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging☆81Updated last week
- code of the registration and deconvolution project☆34Updated 3 years ago
- A collection of useful python utilities from True North Intelligent Algorithms☆34Updated last week
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆29Updated 3 months ago
- A deep-learning library for denoising images using Noise2Void and friends (CARE, PN2V, HDN etc.), with a focus on user-experience and doc…☆81Updated this week
- Neuroclear is a deep-learning-based Python module to train a deep neural network for the task of applying super-resolution to degraded ax…☆29Updated last month
- A napari plugin to analysis point spread functions.☆12Updated last month
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆33Updated last month
- A deeplearning network based on Richardson-Lucy formula☆44Updated 2 years ago
- in situ PSF retrieval for whole cells and tissues☆11Updated 3 years ago
- Z-stack Depth Colorcode ImageJ FIJI plugin☆24Updated 4 years ago
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆25Updated 4 years ago
- Tools for handling FIB-SEM data and annotations☆21Updated last month
- Accelerated Pixel and Object Classifiers (APOC)☆57Updated 2 months ago
- A template repo used to make new napari plugins☆20Updated last week
- Process and analyze surfaces using vedo in napari.☆23Updated 11 months ago
- This repository hosts the code for HDN (associated with the paper https://arxiv.org/pdf/2104.01374.pdf) for pixel and structured noise re…☆36Updated last year
- Utils and convenience functions for large-scale bio-image analysis.☆54Updated last week
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆20Updated 5 months ago
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆71Updated 2 weeks ago