Structural Quality Assessment for Biomolecular Structure Prediction Models
☆94May 22, 2026Updated 2 weeks ago
Alternatives and similar repositories for PXMeter
Users that are interested in PXMeter are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- An accurate and trainable end-to-end protein-ligand docking framework☆138Mar 24, 2025Updated last year
- Official open-source of Accurate structure prediction of immune proteins using parameter-efficient transfer learning☆24Mar 19, 2025Updated last year
- A Unified Evaluation Suite for Protein Design☆135Jan 27, 2026Updated 4 months ago
- IntelliFold: A Controllable Foundation Model for General and Specialized Biomolecular Structure Prediction.☆223May 28, 2026Updated last week
- ☆139Jun 3, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆11Mar 28, 2024Updated 2 years ago
- Open-source docking pipeline leveraging pairwise statistics☆15Jul 26, 2024Updated last year
- ☆63Apr 9, 2024Updated 2 years ago
- Fold Conditioned protein design pipeline based on AF2Multimer Hallucination☆53Mar 25, 2026Updated 2 months ago
- ☆16Dec 10, 2024Updated last year
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆132Feb 26, 2025Updated last year
- Toward High-Accuracy Open-Source Biomolecular Structure Prediction.☆1,934May 6, 2026Updated last month
- Input files and binding free energy values from our benchmark with QuantumBind-RBFE☆16Apr 16, 2025Updated last year
- Sidechain conditioning and modeling for full-atom protein sequence design☆139Nov 11, 2025Updated 6 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Codebase of paper "Structure Language Models for Protein Conformation Generation" (ICLR'25)☆80May 27, 2026Updated 2 weeks ago
- random colab notebooks for biology☆26Aug 23, 2025Updated 9 months ago
- DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models☆400Feb 26, 2026Updated 3 months ago
- A structure checker in python☆25Nov 25, 2024Updated last year
- Reaction-Conditioned Virtual Screening of Enzymes☆44Jun 11, 2025Updated 11 months ago
- ☆80May 6, 2026Updated last month
- Geometric deep learning method to predict protein binding interfaces from a protein structure.☆161Oct 11, 2023Updated 2 years ago
- Dataset and package for working with protein-protein interactions in 3D☆108Apr 28, 2025Updated last year
- FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models☆168Mar 28, 2026Updated 2 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- This repository contains the codebase for the paper "Leveraging ancestral sequence reconstruction for protein representation learning".☆13Apr 13, 2025Updated last year
- AbLang: A language model for antibodies☆165Sep 22, 2023Updated 2 years ago
- It's a package for evaluation of predicted poses, right?☆77Mar 27, 2026Updated 2 months ago
- A benchmark for 3D biomolecular structure prediction models☆69May 11, 2025Updated last year
- Protein hallucination and inpainting with RoseTTAFold☆282Mar 30, 2023Updated 3 years ago
- A package to create, visualize, and analysis PDB-derived pseudo-ensembles.☆12Jan 7, 2026Updated 5 months ago
- List of papers on protein binding site prediction☆11Aug 11, 2023Updated 2 years ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆72Apr 13, 2026Updated last month
- A python implementation of pdb2oniom for QM/MM (ONIOM) calculations☆12Oct 2, 2025Updated 8 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- CARE: a Benchmark Suite for the Classification and Retrieval of Enzymes☆48Jun 17, 2025Updated 11 months ago
- Code for the paper "DLAB - Deep learning methods for structure-basedvirtual screening of antibodies"☆30Oct 28, 2022Updated 3 years ago
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆98Jun 11, 2025Updated last year
- Antigen-receptor Design Against Peptide-MHC Targets☆21Jan 9, 2026Updated 5 months ago
- Protein representation and design under a single training scheme☆24May 17, 2026Updated 3 weeks ago
- ☆215Sep 24, 2024Updated last year
- ☆21Oct 26, 2024Updated last year