broadinstitute / AwesomeGenomicsLinks
Cancer Data Science's go to place for excellent genomics tools and packages
☆32Updated 5 years ago
Alternatives and similar repositories for AwesomeGenomics
Users that are interested in AwesomeGenomics are comparing it to the libraries listed below
Sorting:
- A workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.☆50Updated 2 years ago
- Alternative splicing resource☆58Updated 7 years ago
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆89Updated last month
- A R package and executable for the preprocessing, statistical analysis, and downstream testing and visualization of differentially methyl…☆48Updated 2 years ago
- Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics☆51Updated 3 weeks ago
- 🧬 o r t h o g e n e 🧬✨✨✨✨✨✨✨ Interspecies gene mapping✨✨✨✨✨ 🦠 🔁 🌱 🔁 🌳 🔁 🍎 🔁 🍊 🔁 🪱 🔁 🪰 🔁 🐟 🔁 🦎 🔁 🐓 🔁 🦇 🔁 🐄 🔁 �…☆46Updated 2 months ago
- A continually expanding collection of RNA-seq tools☆53Updated 2 months ago
- A nextflow pipeline to perform state-of-the-art genome-wide association studies.☆76Updated 2 months ago
- Bioinformatics analysis scripts, workflows, general code examples☆54Updated 4 years ago
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆50Updated 6 years ago
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆62Updated 2 months ago
- B-cell and T-cell Adaptive Immune Receptor Repertoire (AIRR) sequencing analysis pipeline using the Immcantation framework☆70Updated last week
- ☆56Updated last month
- A pipeline for differential expression and differential alternative splicing analysis☆67Updated last year
- ☆49Updated 3 years ago
- Website for the precision medicine workshop☆45Updated 3 weeks ago
- Unsupervised correction of gene independent cell responses to CRISPR-cas9☆53Updated 2 years ago
- Ribo-seq TIS Hunter, predicting translation initiation sites and ORFs using riboseq data☆43Updated last month
- ☆22Updated 4 years ago
- A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.☆68Updated 2 weeks ago
- An adaptable Snakemake workflow which uses GATKs best practice recommendations to perform germline mutation calling starting with BAM fil…☆11Updated 4 years ago
- A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays☆30Updated 2 years ago
- Unsorted scripts for bioinformatics☆61Updated 4 years ago
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆36Updated 7 years ago
- This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to…☆60Updated 5 years ago
- Benchmarking of aligners and variant callers for Whole Exome Sequencing data☆20Updated 7 years ago
- The analysis repository for the Open Pediatric Brain Tumor Atlas Project☆105Updated 2 years ago
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools☆82Updated 4 years ago
- An R interface to the MEME Suite☆53Updated 6 months ago
- Visual exploratory analysis of gene expression data☆44Updated last month