coding exercise using TCGA immune infiltration data
☆46Feb 2, 2024Updated 2 years ago
Alternatives and similar repositories for coding_exercise_TCGA_infiltration
Users that are interested in coding_exercise_TCGA_infiltration are comparing it to the libraries listed below
Sorting:
- Chromatin ACcessibility and Transcriptomics Unifying Software☆17Oct 25, 2024Updated last year
- A DIY guide to gene ontology, pathway, and gene set enrichment analysis☆26Aug 11, 2024Updated last year
- ☆19Jul 17, 2024Updated last year
- Containerized cancer subtype prediction tools for gene expression, miRNA, DNA methylation, somatic mutations and copy number variation.☆33Apr 9, 2025Updated 11 months ago
- A pipeline creation tool using Snakemake☆13Mar 5, 2026Updated 2 weeks ago
- SIB course that introduces analysis of NGS data☆17Jan 15, 2026Updated 2 months ago
- ☆33Aug 5, 2024Updated last year
- ClairS - a deep-learning method for long-read somatic small variant calling☆105Mar 12, 2026Updated last week
- RNAseq pipeline based on snakemake☆27Mar 8, 2023Updated 3 years ago
- ☆11May 25, 2025Updated 9 months ago
- All design files and scripts necessary for the construction and use of the optoPlate-96☆11Apr 28, 2022Updated 3 years ago
- autoprot provides standardised, fast, and reliable proteomics data analysis while ensuring a high customisability needed to tailor the an…☆10Updated this week
- Assorted functions for performing numerical methods and solving common problems in systems biology☆28Jan 8, 2025Updated last year
- ☆18Apr 20, 2025Updated 11 months ago
- Mapping DEGs to PPI Networks, Identifying Network Hubs and Highly Connected Proteins, and Simulating Genetic Circuits. An End-to-End DIY …☆26Jan 13, 2025Updated last year
- MultiSKAT is an R-package focused at rare-variant analysis of continuous multiple phenotype data. This project contains the R-codes/funct…☆12Jun 11, 2019Updated 6 years ago
- A GitBook version of the R Crash Course self-tutorials: https://colauttilab.github.io/RCrashCourse☆241Feb 11, 2024Updated 2 years ago
- Browser for ExAC consortium data☆12Oct 23, 2017Updated 8 years ago
- Terraform template to create AWS resources to execute jobs using nextflow☆22Mar 1, 2023Updated 3 years ago
- Short course introducing R programming in the Tidyverse☆11Oct 22, 2024Updated last year
- Template for a computational lab notebook using bookdown☆13Mar 16, 2018Updated 8 years ago
- A rapido and lightweight method for PGS computation☆14Feb 19, 2025Updated last year
- R function to compute simultaneous sup-t confidence bands following Montiel Olea and Plagborg-Møller (2019)☆11Nov 26, 2023Updated 2 years ago
- ImmuCellAI (Immune Cell Abundance Identifier) is a tool to estimate the abundance of 24 immune cells from gene expression dataset includi…☆16May 25, 2025Updated 9 months ago
- R package for RIVER (RNA-Informed Variant Effect on Regulation)☆12Mar 5, 2020Updated 6 years ago
- Hone computational biology skills by re-enacting Figure 1 of modern biology papers☆268Jul 25, 2024Updated last year
- step by step tutorial in the website☆33Feb 22, 2025Updated last year
- ☆18Aug 22, 2021Updated 4 years ago
- Design data and process for the AdaptyvBio protein design competition☆10Dec 11, 2024Updated last year
- ☆11Dec 28, 2019Updated 6 years ago
- AWS for Bioinformatics Researchers☆187Jul 17, 2025Updated 8 months ago
- GCP for Bioinformatics Researchers☆290May 29, 2025Updated 9 months ago
- Send R code/R scripts/shell commands to LSF cluster without leaving R☆26Mar 14, 2025Updated last year
- Download FASTQ files from SRA or ENA repositories.☆376Feb 1, 2026Updated last month
- GeoJSON data for the Ghana Map.☆10Mar 6, 2023Updated 3 years ago
- ☆12Mar 17, 2023Updated 3 years ago
- ☆13Mar 2, 2026Updated 2 weeks ago
- Hungarian tokenizer.☆14Mar 15, 2022Updated 4 years ago
- ☆10Aug 29, 2023Updated 2 years ago