Alternatives and similar repositories for coding_exercise_TCGA_infiltration

Users that are interested in coding_exercise_TCGA_infiltration are comparing it to the libraries listed below

• crazyhottommy / compbio_tutorials
  My youtube programming scripts
  ☆53Updated 4 months ago
• BIMSBbioinfo / compgen_course_2025_module3
  Compgen Course 2025, Module 3 Course Material, Multi-omics integration using deep learning
  ☆58Updated 2 months ago
• sheynkman-lab / Long-Read-Proteogenomics
  A workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.
  ☆46Updated 2 years ago
• crazyhottommy / papers_with_data_to_mine
  published papers with a lot of data
  ☆72Updated 2 months ago
• evanpeikon / Python_Fundamentals_Biology
  Python Fundamentals for Biologists
  ☆31Updated 6 months ago
• crazyhottommy / compbio_resources_chatomics
  ☆27Updated 2 years ago
• crazyhottommy / reproduce_genomics_paper_figures
  step by step tutorial in the website
  ☆21Updated 3 months ago
• nickhir / GermlineMutationCalling
  An adaptable Snakemake workflow which uses GATKs best practice recommendations to perform germline mutation calling starting with BAM fil…
  ☆11Updated 3 years ago
• boulderrinnlab / MASTER_CLASS
  ☆10Updated this week
• sib-swiss / intro-machine-learning-training
  ☆49Updated 3 weeks ago
• evanpeikon / functional_enrichment_analysis
  A DIY guide to gene ontology, pathway, and gene set enrichment analysis
  ☆25Updated 9 months ago
• saezlab / transcriptutorial
  This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL
  ☆55Updated 2 years ago
• BIMSBbioinfo / flexynesis
  A deep-learning based multi-modal data integration suite that aims to achieve synesis in a flexible manner
  ☆54Updated this week
• gexijin / idepGolem
  ☆38Updated last week
• tavareshugo / tutorial_DESeq2_contrasts
  ☆62Updated last year
• evanpeikon / bash_fundamentals
  Introduction to Bash for bioinformatics
  ☆45Updated 9 months ago
• sib-swiss / single-cell-training
  SIB course on single cell transcriptomics by mostly using the Seurat pipeline
  ☆82Updated 2 months ago
• crazyhottommy / machine-learning-resource
  ☆81Updated 6 months ago
• tidyomics / tidyomics
  Easily install and load packages from the tidyomcis ecosystem
  ☆67Updated last year
• hbctraining / main
  ☆53Updated this week
• HussainAther / awesome-alternative-splicing
  Alternative splicing resource
  ☆55Updated 7 years ago
• hamidghaedi / Enrichment-Analysis
  From RNA-seq raw reads to enriched pathways by DEGs
  ☆32Updated last year
• nf-core / airrflow
  B-cell and T-cell Adaptive Immune Receptor Repertoire (AIRR) sequencing analysis pipeline using the Immcantation framework
  ☆60Updated last month
• crazyhottommy / oneliner_100day_challenge
  Bioinformatics one-liner for 100 days
  ☆47Updated last year
• liulab-dfci / bioinfo-combio
  The rendered book can be found at https://liulab-dfci.github.io/bioinfo-combio/
  ☆96Updated 3 years ago
• omgenomics / bio-data-zoo
  Example genomics data for tool developers
  ☆112Updated 10 months ago
• evanpeikon / Amilioride_Drug_MOA
  Uncovering Amiloride's Mechanisms of Action in Multiple Myeloma: A Bioinformatics Approach
  ☆25Updated 4 months ago
• RabadanLab / arcasHLA
  Fast and accurate in silico inference of HLA genotypes from RNA-seq
  ☆134Updated 9 months ago
• hamidghaedi / RNA-seq-differential-expression
  Differential gene expression analysis on RNA-seq data
  ☆11Updated last year
• ucdavis-bioinformatics-training / 2017_2018-single-cell-RNA-sequencing-Workshop-UCD_UCB_UCSF
  2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF
  ☆36Updated 6 years ago