Alternatives and similar repositories for PLAbDab:

Users that are interested in PLAbDab are comparing it to the libraries listed below

• oxpig / SPACE2
  Tool for rapid clustering of antibody models by the structure of their CDRs.
  ☆20Updated 5 months ago
• oxpig / kasearch
  KA-Search: Rapid and exhaustive sequence identity search of known antibodies
  ☆22Updated 9 months ago
• oxpig / PLAbDab
  The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…
  ☆25Updated 9 months ago
• Fleishman-Lab / CUMAb
  ☆19Updated 2 weeks ago
• piercelab / tcrmodel2
  ☆39Updated last month
• gv20-therapeutics / antibody-in-pytorch
  Machine learning models for antibody sequences in PyTorch
  ☆39Updated 3 years ago
• alchemab / antiberta
  Public repository describing training and testing of AntiBERTa.
  ☆58Updated 2 years ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆49Updated last month
• Wang-lab-UCSD / RESP
  The code used to generate the results from Parkinson / Hard et al. 2022
  ☆17Updated 5 months ago
• churchlab / low-N-protein-engineering
  Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".
  ☆58Updated 4 years ago
• kevinmicha / ANTIPASTI
  ANTIPASTI (ANTIbody Predictor of Affinity from STructural Information) is a Deep Learning model that predicts the binding affinity of ant…
  ☆25Updated 5 months ago
• lehner-lab / MoCHI
  Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…
  ☆44Updated 2 weeks ago
• oxpig / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆47Updated 2 years ago
• alchemab / parapred-pytorch
  PyTorch implementation of Parapred (Liberis et al., 2018) with Paratyping (Richardson et al., 2021)
  ☆20Updated last year
• dahjan / DMS_opt
  ☆68Updated 4 years ago
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆36Updated 6 months ago
• robpearc / DeepFoldRNA
  ☆35Updated last year
• AIforGreatGood / biotransfer
  Machine learning-driven antibody design
  ☆55Updated last year
• LPDI-EPFL / topobuilder
  Parametric Building of de novo Functional Topologies
  ☆44Updated 3 years ago
• Exscientia / abodybuilder3
  ☆46Updated 6 months ago
• xinyu-dev / annotate_v
  Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python
  ☆30Updated last year
• Doudna-lab / GARNET_DL
  ☆36Updated 3 months ago
• AbSciBio / igdesign
  ☆37Updated 3 months ago
• regeneron-mpds / propermab
  ☆22Updated 3 weeks ago
• csi-greifflab / developability_profiling
  ☆21Updated 3 months ago
• oxpig / Paragraph
  Antibody paratope prediction using Graph Neural Networks with minimal feature vectors
  ☆36Updated 2 years ago
• kundajelab / ImmuneCLIP
  CLIP-based model for aligning epitopes to immune receptors
  ☆11Updated last month
• VarunUllanat / mint
  Learning the language of protein-protein interactions
  ☆70Updated this week
• oxpig / AbLang2
  An antibody-specific language model focusing on NGL prediction
  ☆27Updated 8 months ago
• csi-greifflab / manuscript_insilico_antibody_generation
  ☆24Updated 3 years ago