brennanaba / PLAbDabLinks
The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody sequences and structures
☆13Updated 2 years ago
Alternatives and similar repositories for PLAbDab
Users that are interested in PLAbDab are comparing it to the libraries listed below
Sorting:
- Tool for rapid clustering of antibody models by the structure of their CDRs.☆23Updated 6 months ago
- KA-Search: Rapid and exhaustive sequence identity search of known antibodies☆23Updated last year
- ☆21Updated 10 months ago
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆31Updated last year
- Machine learning models for antibody sequences in PyTorch☆41Updated 4 years ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆117Updated 6 months ago
- ☆46Updated 10 months ago
- Public repository describing training and testing of AntiBERTa.☆61Updated 2 years ago
- ☆74Updated 5 years ago
- Machine learning-driven antibody design☆63Updated 2 years ago
- PyTorch implementation of Parapred (Liberis et al., 2018) with Paratyping (Richardson et al., 2021)☆20Updated 2 years ago
- Tools for annotation, processing and ML for antibody sequences☆39Updated this week
- Predict the structure of immune receptor proteins☆59Updated last year
- Unconstrained lattice antibody-antigen bindings generator☆111Updated 2 months ago
- Source code for fitting thermodynamic models (MoCHI), downstream analyses and to reproduce all figures in the following publication: Mapp…☆22Updated 2 years ago
- Convenience Python APIs for antibody numbering using ANARCI☆115Updated 8 months ago
- Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python☆30Updated 2 years ago
- ☆28Updated 5 months ago
- Inference code for Bio-Inspired Antibody Language Model☆26Updated last year
- ☆23Updated 4 years ago
- [Nature Machine Intelligence] ImmunoStruct enables multimodal deep learning for immunogenicity prediction☆34Updated this week
- ☆51Updated 2 years ago
- Neural networks for deep mutational scanning data☆72Updated 8 months ago
- mBER - Manifold Binder Engineering and Refinement. mBER enables antibody binder design by leveraging structure templates and sequence con…☆102Updated last month
- ☆47Updated last year
- A Collection of Platform, Tools, and Resources for Antibody Engineering☆21Updated 2 years ago
- A computational method to optimize degenerate codons for synthesizing an informed combinatorial mutagenesis protein variant library☆17Updated 11 months ago
- ANTIPASTI (ANTIbody Predictor of Affinity from STructural Information) is a Deep Learning model that predicts the binding affinity of ant…☆38Updated last year
- ☆56Updated 5 months ago
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆37Updated 2 years ago