Alternatives and similar repositories for PythonTUBS

Users that are interested in PythonTUBS are comparing it to the libraries listed below

• immunitastx / coding_exercise_TCGA_infiltration
  coding exercise using TCGA immune infiltration data
  ☆46Updated last year
• evanpeikon / math_for_compbio
  This repository contains math tutorials I created for Bioinformatics and Computational Biology.
  ☆95Updated last year
• sib-swiss / first-steps-with-python-training
  repository of the 3-day course "First steps with Python in Life Sciences" from SIB-training
  ☆65Updated last week
• fayjustin / computational_biology
  course material
  ☆135Updated 3 years ago
• omgenomics / bio-data-zoo
  Example genomics data for tool developers
  ☆117Updated last year
• evanpeikon / bash_fundamentals
  Introduction to Bash for bioinformatics
  ☆50Updated last year
• HadrienG / tutorials
  Various bioinformatics tutorials
  ☆62Updated 2 years ago
• sib-swiss / first-steps-with-R-training
  repository of the 2-day course "First steps with R in Life Sciences" from SIB-training
  ☆53Updated 2 months ago
• crazyhottommy / compbio_resources_chatomics
  ☆27Updated 2 years ago
• shenwei356 / perfect-bioinformatic-tools
  What should perfect bioinformatic tools be like?
  ☆143Updated 2 months ago
• sib-swiss / intro-machine-learning-training
  ☆60Updated last week
• crazyhottommy / reproduce_genomics_paper_figures
  step by step tutorial in the website
  ☆30Updated 10 months ago
• Ashish438 / Python-for-Bioinformatics
  Python for Bioinformatics consist of a variety of python programmes,frequently used by bioinformaticians while handling biological data e…
  ☆44Updated last year
• urmi-21 / orfipy
  Fast and flexible ORF finder
  ☆76Updated 4 years ago
• bpucker / teaching
  This repository gives an overview of my teaching activities. Links to slides and data sets are included. Feel free to re-use my content.
  ☆61Updated last week
• sib-swiss / RNAseq-introduction-training
  Webpage of the "Introduction to RNA-Seq: From quality control to pathway analysis - streamed" SIB course.
  ☆16Updated 3 months ago
• melbournebioinformatics / melbournebioinformatics.github.io
  Melbourne Bioinformatics documentation in markdown format
  ☆120Updated last week
• novoalab / Nano-tRNAseq
  Quantitative analysis of native tRNA populations using direct RNA nanopore sequencing (Lucas*, Pryszcz* et al., Nat Biotech 2023)
  ☆16Updated last year
• evanpeikon / Python_Fundamentals_Biology
  Python Fundamentals for Biologists
  ☆39Updated last year
• evanpeikon / Amilioride_Drug_MOA
  Uncovering Amiloride's Mechanisms of Action in Multiple Myeloma: A Bioinformatics Approach
  ☆27Updated 11 months ago
• hoelzer-lab / rnaflow
  A simple RNA-Seq differential gene expression pipeline using Nextflow
  ☆100Updated 5 months ago
• sheynkman-lab / Long-Read-Proteogenomics
  A workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.
  ☆50Updated 3 years ago
• nickhir / GermlineMutationCalling
  An adaptable Snakemake workflow which uses GATKs best practice recommendations to perform germline mutation calling starting with BAM fil…
  ☆11Updated 4 years ago
• riboviz / riboviz
  Analysis and Visualization of Ribosome Profiling Data
  ☆31Updated 4 months ago
• crazyhottommy / oneliner_100day_challenge
  Bioinformatics one-liner for 100 days
  ☆49Updated last year
• YuLab-SMU / ggmsa
  Visualizing publication-quality multiple sequence alignment using ggplot2
  ☆217Updated 2 months ago
• ssayols / rrvgo
  Reduce + Visualize Gene Ontology
  ☆35Updated 5 months ago
• glarue / jgi-query
  A simple command-line tool to download data from Joint Genome Institute databases
  ☆51Updated 3 years ago
• Juke34 / awesome-awesomeness-bioinformatics
  A list of awesome awesomeness related to bioinformatics and associated fields
  ☆42Updated 10 months ago
• borenstein-lab / microbiome-metabolome-curated-data
  ☆77Updated last year