Alternatives and similar repositories for PythonTUBS

Users that are interested in PythonTUBS are comparing it to the libraries listed below

• immunitastx / coding_exercise_TCGA_infiltration
  coding exercise using TCGA immune infiltration data
  ☆46Updated last year
• sib-swiss / first-steps-with-python-training
  repository of the 3-day course "First steps with Python in Life Sciences" from SIB-training
  ☆64Updated last week
• fayjustin / computational_biology
  course material
  ☆132Updated 2 years ago
• evanpeikon / math_for_compbio
  This repository contains math tutorials I created for Bioinformatics and Computational Biology.
  ☆95Updated last year
• sib-swiss / first-steps-with-R-training
  repository of the 2-day course "First steps with R in Life Sciences" from SIB-training
  ☆51Updated last week
• omgenomics / bio-data-zoo
  Example genomics data for tool developers
  ☆116Updated last year
• evanpeikon / bash_fundamentals
  Introduction to Bash for bioinformatics
  ☆48Updated last year
• nickhir / GermlineMutationCalling
  An adaptable Snakemake workflow which uses GATKs best practice recommendations to perform germline mutation calling starting with BAM fil…
  ☆11Updated 4 years ago
• HadrienG / tutorials
  Various bioinformatics tutorials
  ☆61Updated 2 years ago
• crazyhottommy / compbio_resources_chatomics
  ☆27Updated 2 years ago
• sib-swiss / intro-machine-learning-training
  ☆54Updated last week
• shenwei356 / perfect-bioinformatic-tools
  What should perfect bioinformatic tools be like?
  ☆134Updated last week
• crazyhottommy / reproduce_genomics_paper_figures
  step by step tutorial in the website
  ☆27Updated 7 months ago
• novoalab / Nano-tRNAseq
  Quantitative analysis of native tRNA populations using direct RNA nanopore sequencing (Lucas*, Pryszcz* et al., Nat Biotech 2023)
  ☆16Updated last year
• hoelzer-lab / rnaflow
  A simple RNA-Seq differential gene expression pipeline using Nextflow
  ☆100Updated 2 months ago
• urmi-21 / orfipy
  Fast and flexible ORF finder
  ☆76Updated 3 years ago
• evanpeikon / R_Fundamentals_Biologists
  R Fundamentals for Biologists
  ☆33Updated 8 months ago
• melbournebioinformatics / MelBioInf_docs
  Melbourne Bioinformatics documentation in markdown format
  ☆119Updated this week
• bpucker / teaching
  This repository gives an overview of my teaching activities. Links to slides and data sets are included. Feel free to re-use my content.
  ☆52Updated this week
• bioinformaticsdotca / bioinformaticsdotca.github.io
  Repo for student website
  ☆27Updated last week
• sheynkman-lab / Long-Read-Proteogenomics
  A workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.
  ☆48Updated 2 years ago
• biostars / biostar-handbook
  Issue tracker for the Biostar Handbook
  ☆64Updated 3 years ago
• griffithlab / rnabio.org
  website for the rnaseq course
  ☆109Updated 3 weeks ago
• mdozmorov / Bioinformatics_notes
  Bioinformatics and genomics resources
  ☆78Updated last month
• ShiLab-Bioinformatics / subread
  The Subread software package is a tool kit for processing next-gen sequencing data. It includes Subread aligner, Subjunc exon-exon juncti…
  ☆47Updated 2 years ago
• nf-core / smrnaseq
  A small-RNA sequencing analysis pipeline
  ☆94Updated 4 months ago
• evanpeikon / Python_Fundamentals_Biology
  Python Fundamentals for Biologists
  ☆38Updated 10 months ago
• sib-swiss / RNAseq-introduction-training
  Webpage of the "Introduction to RNA-Seq: From quality control to pathway analysis - streamed" SIB course.
  ☆16Updated last week
• GuyTeichman / RNAlysis
  Analyze your RNA sequencing data without writing a single line of code
  ☆139Updated 4 months ago
• borenstein-lab / microbiome-metabolome-curated-data
  ☆74Updated 11 months ago