CAS-ReproLab / Pyochem_1Links
Learn fundamentals of scientific computing for biochemistry using Jupyter notebooks in Python
☆16Updated 3 weeks ago
Alternatives and similar repositories for Pyochem_1
Users that are interested in Pyochem_1 are comparing it to the libraries listed below
Sorting:
- SIGnature is a Python package that empowers researchers to rapidly query gene sets across diverse single-cell RNA sequencing (scRNA-seq) …☆22Updated 2 weeks ago
- Java Image Processing Pipeline (JIPipe) is a graphical batch processing language for the ImageJ ecosystem☆19Updated 7 months ago
- File format for 96-well plate layouts.☆23Updated 2 years ago
- Transform CellProfiler and DeepProfiler data for processing image-based profiling readouts with Pycytominer and other Cytomining tools.☆17Updated last week
- Vector graphics cartoons from protein structure☆56Updated 3 years ago
- A parser to read .imzML files with python☆48Updated last year
- Methods for mapping genomic data onto 3D protein structure.☆28Updated 3 years ago
- A network based gene classification library to generate genome wide predictions about genes that are functionally similar to the input ge…☆20Updated 3 weeks ago
- Spatial Transcriptomics Dashboard☆27Updated 2 years ago
- Tutorial on how to use Ginkgo AI embedding APIs for scientific problems☆19Updated last year
- a collection of colabs useful for molecular biology☆31Updated last year
- bioinformatics visualization tools with pyviz/bokeh☆20Updated 2 years ago
- A python package to explore pathways, diseases and drugs associated to a list of targets (genes, proteins, etc)☆20Updated last year
- ☆12Updated last year
- Proteomic Data Analysis with Python (pandas, scikit-learn, numpy, scipy)☆24Updated 2 years ago
- SPECTRA: Spectral framework for evaluation of biomedical AI models☆41Updated 9 months ago
- Pipeline for assessing the tractability of potential targets (starting from Gene IDs)☆29Updated 10 months ago
- A platform to do RNA science☆27Updated 4 years ago
- NeST-VNN repo☆12Updated 6 months ago
- A graphical interface for sklearn classification to introduce machine learning to biologists☆13Updated 9 months ago
- A Python API for estimating statistical high-order epistasis in genotype-phenotype maps.☆37Updated 2 years ago
- MassDash: A web-based dashboard for streamlined DIA-MS visualization, analysis, prototyping, and optimization☆21Updated this week
- qpx (Quantitative Proteomics eXchange) format (aka quantms.io) a format to capture a full proteomics experiment☆14Updated last week
- PDBe Programming Interfaces information☆14Updated 7 years ago
- Make machine learning simpler with Galaxy☆12Updated last year
- Python package for analyzing and visualizing iModulons☆14Updated 3 weeks ago
- This page hosts NeKo, a python package that allow the user to automatically build gene regulatory networks from any databases.☆16Updated 3 months ago
- Generate Dose-Response Curves in Python☆12Updated 3 months ago
- ☆23Updated 3 weeks ago
- Download and Convert METASPACE datasets to common formats such as AnnData or SpatialData☆13Updated last year