Alternatives and similar repositories for Pyochem_1

Users that are interested in Pyochem_1 are comparing it to the libraries listed below

• lakigigar / bioRxiv-diff
  ☆12Updated 8 months ago
• krishnanlab / PyGenePlexus
  A network based gene classification library to generate genome wide predictions about genes that are functionally similar to the input ge…
  ☆20Updated this week
• sagar87 / spatialproteomics
  Spatialproteomics is a light weight wrapper around xarray with the intention to facilitate the data exploration and analysis of highly mu…
  ☆25Updated last week
• czi-ai / transcriptformer
  ☆38Updated last week
• ismms-himc / visium-clustergrammer2
  Spatial Transcriptomics Dashboard
  ☆28Updated last year
• alexandrovteam / SpaceM
  ☆15Updated 8 months ago
• cytomining / CytoTable
  Transform CellProfiler and DeepProfiler data for processing image-based profiling readouts with Pycytominer and other Cytomining tools.
  ☆10Updated this week
• hgbrian / biocolabs
  a collection of colabs useful for molecular biology
  ☆30Updated last year
• de-Boer-Lab / hashFrag
  A command-line tool to mitigate homology-based data leakage in sequence-to-expression models
  ☆14Updated last month
• applied-systems-biology / jipipe
  Java Image Processing Pipeline (JIPipe) is a graphical batch processing language for the ImageJ ecosystem
  ☆16Updated 3 weeks ago
• kalekundert / wellmap
  File format for 96-well plate layouts.
  ☆23Updated last year
• manzt / pygv
  a minimal, scriptable genome browser for python
  ☆51Updated 4 months ago
• theislab / geome
  ☆16Updated 10 months ago
• stracquadaniolab / pygna
  A Python package for gene network analysis
  ☆32Updated 2 years ago
• immunitastx / monkeybread
  Analyzing cellular niches in spatial transcriptomics data
  ☆29Updated 5 months ago
• mvinyard / torch-adata
  Create PyTorch Datasets from AnnData
  ☆20Updated 2 months ago
• laminlabs / bionty
  Registries for biological entities, coupled to public ontologies.
  ☆15Updated this week
• sbl-sdsc / mmtf-genomics
  Methods for mapping genomic data onto 3D protein structure.
  ☆28Updated 3 years ago
• scverse / formulaic-contrasts
  Build contrasts for models defined with formulaic
  ☆12Updated this week
• broadchenf / Slideseq
  ☆11Updated 6 years ago
• quadbio / cell-annotator
  Automatically annotate cell types, consistently across samples.
  ☆11Updated last month
• brineylab / grp-paper
  Code and data used in The Great Repertoire Project
  ☆30Updated 3 years ago
• crazyhottommy / Machine_learning_drug_discovery
  ☆27Updated last month
• calico / velodyn
  Dynamical systems methods for RNA velocity analysis
  ☆24Updated 3 years ago
• cantinilab / Mowgli
  Single-cell multi-omics integration using Optimal Transport
  ☆43Updated 8 months ago
• srivarra / annsel
  A user-friendly library that brings familiar DataFrame-style operations to AnnData objects with a simple and expressive API.
  ☆10Updated this week
• knutdrand / bionumpy
  ☆9Updated 11 months ago
• gitter-lab / ml4bio
  A graphical interface for sklearn classification to introduce machine learning to biologists
  ☆12Updated last month
• theislab / batchglm
  Fit generalized linear models in python.
  ☆27Updated 2 years ago
• jordisr / cellscape
  Vector graphics cartoons from protein structure
  ☆44Updated 2 years ago