Alternatives and similar repositories for hdf2tab

Users that are interested in hdf2tab are comparing it to the libraries listed below

• evoldoers / wtfgenes
  What's The Function of these genes?
  ☆22Updated 8 years ago
• alimanfoo / vcfnp
  Load numpy arrays and HDF5 files from VCF (variant call format)
  ☆31Updated 8 years ago
• uio-cels / genomicgraphcoords
  Online material and code base for the article Coordinates and Intervals in Graph Based Reference Genomes
  ☆11Updated 8 years ago
• arq5x / ggd
  ☆43Updated 9 years ago
• cancerit / cgpBigWig
  BigWig manpulation tools using libBigWig and htslib
  ☆29Updated 11 months ago
• lkuchenb / imseq
  IMSEQ - IMmunogenetic SEQuence Analysis
  ☆15Updated 6 years ago
• tseemann / homebrew-bioinformatics-linux
  Homebrew formulae for bioinformatics software only available for Linux
  ☆27Updated 5 years ago
• DecodeGenetics / BamHash
  ☆37Updated 4 years ago
• epiviz / epiviz
  EpiViz is a scientific information visualization tool for genetic and epigenetic data, used to aid in the exploration and understanding o…
  ☆70Updated 2 years ago
• bioforensics / rsidx
  Library for indexing VCF files for random access searches by rsID
  ☆17Updated last year
• browning-lab / ibd-ends
  The ibd-ends program performs probabilistic estimation of identity-by-descent segment endpoints.
  ☆10Updated 3 years ago
• quinlan-lab / ccrhtml
  A small repo for storing the code for making the files and html for CCRs.
  ☆22Updated 5 years ago
• brentp / bw-python
  python wrapper to dpryan79's bigwig library using cffi
  ☆19Updated 9 years ago
• gmcvicker / draw_genes
  A flexible python program for generating figures from regions of the genome.
  ☆13Updated 6 years ago
• statgen / savvy
  Interface to various variant calling formats.
  ☆30Updated last year
• hwanglab / divine
  Divine: Prioritizing Genes for Rare Mendelian Disease in Whole Exome Sequencing Data
  ☆13Updated 6 years ago
• bede / tictax
  Streaming sequence classification with web services ✓📌
  ☆19Updated 2 years ago
• mklarqvist / djinn
  C++ library for analysing and storing large-scale cohorts of sequence variant data
  ☆17Updated 5 years ago
• COMBINE-lab / shoal
  Improved multi-sample transcript abundance estimates using adaptive priors
  ☆20Updated 6 years ago
• lairdm / islandplot
  SVG based genome viewer written in javascript using D3
  ☆33Updated 10 years ago
• mklarqvist / tachyon
  High-level API for storing and querying sequence variant data
  ☆20Updated 6 years ago
• ryanlayer / svv
  Stupid Simple Structural Variant View
  ☆25Updated 8 years ago
• csiro-crop-informatics / biokanga
  An integrated high performance bioinformatics toolkit
  ☆23Updated 6 years ago
• koelling / dnacol
  Color DNA/RNA bases in terminal output
  ☆21Updated 7 years ago
• BenLangmead / qtip
  Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities
  ☆25Updated 5 years ago
• salmonteam / SalmonBlogResponse
  Response to blog post about Salmon
  ☆37Updated 7 years ago
• medvedevgroup / varmatch
  robust matching of small variant datasets using flexible scoring schemes
  ☆11Updated 5 years ago
• karel-brinda / rnftools
  RNF framework for NGS: simulation of reads, evaluation of mappers, conversion of RNF-compliant data.
  ☆14Updated 6 years ago
• quinlan-lab / ccr
  Building the constrained coding regions (CCR) model
  ☆16Updated 6 years ago
• dcjones / isolator
  Rapid and robust analysis of RNA-Seq experiments.
  ☆32Updated 9 years ago