Alternatives and similar repositories for bioc

Users that are interested in bioc are comparing it to the libraries listed below

• gyorilab / gilda
  Grounding of biomedical named entities with contextual disambiguation
  ☆44Updated 3 months ago
• ncbi-nlp / BioC-JSON
  Tool that converts between BioC XML files and BioC JSON files
  ☆18Updated 8 years ago
• 2mh / PyBioC
  Python library for work with BioCreative files
  ☆13Updated 7 years ago
• chenzxlabhzau / pyMeSHSim
  a module to calculate the MeSH similarity
  ☆26Updated 4 years ago
• OntoGene / PyBioC
  Python library for working with BioC files
  ☆13Updated 7 years ago
• luozhhub / pyMeSHSim
  a module to calculate the MeSH similarity
  ☆27Updated 3 years ago
• greenelab / pubtator
  Retrieve and process PubTator annotations
  ☆44Updated 2 years ago
• LHNCBC / SemRep
  ☆70Updated 3 years ago
• OntoGene / OGER
  ☆24Updated 4 years ago
• ncbi / AIONER
  AIONER
  ☆61Updated last year
• DeepPhe / DeepPhe-Release
  Public release of the DeepPhe analytic software
  ☆30Updated 2 months ago
• WGLab / Bioformer
  Bioformer: an efficient BERT model for biomedical text mining
  ☆55Updated 2 years ago
• ncbi / BioConceptVec
  ☆41Updated 5 years ago
• Aitslab / EasyNER
  a customzable pipeline for information extraction
  ☆17Updated 5 months ago
• greenelab / snorkeling
  Extracting biomedical relationships from literature with Snorkel 🏊
  ☆58Updated 4 years ago
• ncbi-nlp / TeamTat
  Text annotation tool for team collaboration
  ☆42Updated last year
• beamandrew / cui2vec
  ☆55Updated 5 years ago
• ncbi / BioRED
  ☆26Updated 2 years ago
• ncbi-nlp / DeepRel
  A convolutional neural network model for relation extraction.
  ☆12Updated 2 years ago
• larsjuhljensen / tagger
  ☆22Updated 2 years ago
• Aitslab / BioNLP
  Repository for student projects within biomedical text mining from Lund University
  ☆56Updated 2 years ago
• ncbi-nlp / PhenoTagger
  PhenoTagger
  ☆61Updated last year
• BaderLab / saber
  Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work …
  ☆102Updated 5 years ago
• sg-wbi / belb
  Biomedical Entity Linking Benchmark
  ☆14Updated 10 months ago
• jakelever / pubrunner
  A framework for keeping biomedical text mining result up-to-date
  ☆42Updated 5 years ago
• OHNLP / MedTator
  A Serverless Text Annotation Tool for Corpus Development
  ☆57Updated 8 months ago
• usmaann / BioALBERT
  Benchmarking for Biomedical Natural Language Processing Tasks with a Domain Specific ALBERT
  ☆29Updated 4 years ago
• DiseaseOntology / SymptomOntology
  The symptom ontology was designed around the guiding concept of a symptom being: “A perceived change in function, sensation or appearance…
  ☆42Updated last year
• biomedicalinformaticsgroup / cadmus
  A full-text article retrieval pipeline for biomedical literature.
  ☆21Updated last month
• UCDenver-ccp / CRAFT
  ☆74Updated last year