Alternatives and similar repositories for gilda

Users that are interested in gilda are comparing it to the libraries listed below

• OntoGene / OGER
  ☆24Updated 5 years ago
• related-sciences / nxontology
  NetworkX-based Python library for representing ontologies
  ☆90Updated 2 years ago
• biopragmatics / pyobo
  📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures
  ☆73Updated last week
• bionlplab / bioc
  Data structures and code to read/write BioC XML and Json.
  ☆33Updated 2 years ago
• biopragmatics / biomappings
  🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…
  ☆57Updated this week
• biolink / kgx
  KGX is a Python library for exchanging Knowledge Graphs
  ☆136Updated 2 months ago
• chenzxlabhzau / pyMeSHSim
  a module to calculate the MeSH similarity
  ☆26Updated 4 years ago
• cthoyt / umls_downloader
  Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically
  ☆41Updated last year
• LHNCBC / SemRep
  ☆70Updated 3 years ago
• luozhhub / pyMeSHSim
  a module to calculate the MeSH similarity
  ☆27Updated 4 years ago
• ncbi-nlp / TeamTat
  Text annotation tool for team collaboration
  ☆43Updated last year
• greenelab / pubtator
  Retrieve and process PubTator annotations
  ☆44Updated 2 years ago
• greenelab / snorkeling
  Extracting biomedical relationships from literature with Snorkel 🏊
  ☆58Updated 4 years ago
• DiseaseOntology / SymptomOntology
  The symptom ontology was designed around the guiding concept of a symptom being: “A perceived change in function, sensation or appearance…
  ☆44Updated last year
• biolink / biolink-model-toolkit
  A collection of useful python functions for looking up information and working with the Biolink Model
  ☆24Updated last week
• EBISPOT / OXO
  Ontology cross-reference and mapping service
  ☆20Updated 7 months ago
• SmartDataAnalytics / BioKEEN
  A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…
  ☆45Updated 3 years ago
• gyorilab / adeft
  Tool for disambiguating acronyms and abbreviations in text for NLP applications
  ☆22Updated last week
• callahantiff / PheKnowLator
  PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models
  ☆196Updated last year
• AstraZeneca / KAZU
  Fast, world class biomedical NER
  ☆87Updated 9 months ago
• dhimmel / obonet
  OBO-formatted ontologies → networkx (Python 3)
  ☆150Updated 8 months ago
• chanzuckerberg / ChemDisGene
  Bio relation extraction labeled dataset
  ☆45Updated 3 years ago
• AstraZeneca / onto_merger
  OntoMerger is an ontology alignment library for deduplicating knowledge graph nodes that represent the same domain.
  ☆101Updated last year
• biolink / ontobio
  python library for working with ontologies and ontology associations
  ☆132Updated 9 months ago
• OntoGene / PyBioC
  Python library for working with BioC files
  ☆13Updated 7 years ago
• larsjuhljensen / tagger
  ☆23Updated 2 years ago
• RTXteam / RTX-KG2
  Build system for the RTX-KG2pre biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)
  ☆52Updated 3 weeks ago
• biopragmatics / bioregistry
  📮 An integrative registry of biological databases, ontologies, and nomenclatures.
  ☆137Updated this week
• ncbi-nlp / DeepRel
  A convolutional neural network model for relation extraction.
  ☆12Updated 2 years ago
• OHNLP / MedTator
  A Serverless Text Annotation Tool for Corpus Development
  ☆57Updated 9 months ago