luozhhub / pyMeSHSim
a module to calculate the MeSH similarity
☆24Updated 3 years ago
Alternatives and similar repositories for pyMeSHSim:
Users that are interested in pyMeSHSim are comparing it to the libraries listed below
- a module to calculate the MeSH similarity☆26Updated 3 years ago
- Data structures and code to read/write BioC XML and Json.☆31Updated last year
- Retrieve and process PubTator annotations☆44Updated last year
- Grounding of biomedical named entities with contextual disambiguation☆43Updated this week
- Python library for working with BioC files☆13Updated 6 years ago
- ☆66Updated 2 years ago
- ☆24Updated 4 years ago
- Public release of the DeepPhe analytic software☆30Updated 2 years ago
- Python library for work with BioCreative files☆13Updated 6 years ago
- ☆41Updated 5 years ago
- Turning Ontologies Plus Annotation Properties into Vectors☆35Updated 4 years ago
- Extracting biomedical relationships from literature with Snorkel 🏊☆58Updated 4 years ago
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…☆45Updated 2 years ago
- ☆22Updated 2 years ago
- A Silver Standard Corpus of Human Phenotype-Gene Relations☆13Updated 2 years ago
- ☆53Updated 4 years ago
- A framework for keeping biomedical text mining result up-to-date☆42Updated 4 years ago
- A near real-time named-entity recognizer☆59Updated 9 months ago
- A convolutional neural network model for relation extraction.☆13Updated 2 years ago
- Bio relation extraction labeled dataset☆44Updated 2 years ago
- A Standard Database for Drug Repositioning☆18Updated 7 years ago
- This repository contains the corpora and supplementary data, along with instructions for recreating the experiments, for our paper: "Towa…☆15Updated 5 years ago
- Bioformer: an efficient BERT model for biomedical text mining☆54Updated 2 years ago
- A clinical BERT-based NLP tool for parsing clinical trial abstracts following the PICO framework☆45Updated 4 years ago
- Biomedical Entity Linking Benchmark☆11Updated 3 months ago
- Build system for the RTX-KG2 biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)☆40Updated this week
- MIL-RBERT: A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction (BioNLP @ ACL 2020)☆19Updated last year
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically☆40Updated 11 months ago
- A Serverless Text Annotation Tool for Corpus Development☆55Updated last month
- Benchmarking for Biomedical Natural Language Processing Tasks with a Domain Specific ALBERT☆28Updated 3 years ago