luozhhub / pyMeSHSimLinks
a module to calculate the MeSH similarity
☆27Updated 3 years ago
Alternatives and similar repositories for pyMeSHSim
Users that are interested in pyMeSHSim are comparing it to the libraries listed below
Sorting:
- a module to calculate the MeSH similarity☆26Updated 4 years ago
- ☆70Updated 3 years ago
- Data structures and code to read/write BioC XML and Json.☆32Updated 2 years ago
- Grounding of biomedical named entities with contextual disambiguation☆45Updated 3 months ago
- Retrieve and process PubTator annotations☆44Updated 2 years ago
- Text annotation tool for team collaboration☆43Updated last year
- Python library for working with BioC files☆13Updated 7 years ago
- PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models☆195Updated last year
- BERN2: an advanced neural biomedical namedentity recognition and normalization tool☆200Updated last year
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically☆41Updated last year
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…☆45Updated 3 years ago
- The symptom ontology was designed around the guiding concept of a symptom being: “A perceived change in function, sensation or appearance…☆43Updated last year
- ☆24Updated 4 years ago
- ☆22Updated 2 years ago
- AIONER☆62Updated last year
- Knowledge graphs generation from unstructured text.☆71Updated 9 months ago
- Fast, world class biomedical NER☆86Updated 8 months ago
- Turning Ontologies Plus Annotation Properties into Vectors☆35Updated 5 years ago
- Extracting biomedical relationships from literature with Snorkel 🏊☆58Updated 4 years ago
- Repository for student projects within biomedical text mining from Lund University☆56Updated 2 years ago
- ☆42Updated 5 years ago
- Biomedical Entity Linking Benchmark☆14Updated 11 months ago
- A Serverless Text Annotation Tool for Corpus Development☆57Updated 8 months ago
- Build system for the RTX-KG2pre biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)☆52Updated this week
- Bio relation extraction labeled dataset☆45Updated 3 years ago
- ☆27Updated 2 years ago
- Tool that converts between BioC XML files and BioC JSON files☆18Updated 8 years ago
- ☆55Updated 5 years ago
- NetworkX-based Python library for representing ontologies☆90Updated 2 years ago
- a customzable pipeline for information extraction☆18Updated 5 months ago