Python library for work with BioCreative files
☆13Mar 28, 2018Updated 8 years ago
Alternatives and similar repositories for PyBioC
Users that are interested in PyBioC are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tool that converts between BioC XML files and BioC JSON files☆19Jan 10, 2017Updated 9 years ago
- Data structures and code to read/write BioC XML and Json.☆34Aug 21, 2023Updated 2 years ago
- This is the open source repository of my Recursive Neural Network for the BioCreative 6 track5 - chemprot task.☆11Feb 22, 2019Updated 7 years ago
- Mark2Cure allows anyone that can read English, regardless of background, to help in the process of biomedical discovery.☆14Jan 11, 2023Updated 3 years ago
- ☆24Nov 30, 2020Updated 5 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Python library for working with BioC files☆13Mar 28, 2018Updated 8 years ago
- MIC-CIS entry in PharmaCoNER, Bacteria Biotope (BB 2029) & SeeDev 2019 Shared Tasks in EMNLP '19☆11Feb 22, 2020Updated 6 years ago
- Retrieve and process PubTator annotations☆44Aug 10, 2023Updated 2 years ago
- Classifying Relations via Long Short-Term Memory Networks along Biomedical Ontologies☆15Feb 15, 2023Updated 3 years ago
- Analysis code for knowledge discovery project☆12Sep 25, 2018Updated 7 years ago
- ☆39Nov 16, 2020Updated 5 years ago
- This repository contains the corpora and supplementary data, along with instructions for recreating the experiments, for our paper: "Towa…☆15Jul 26, 2019Updated 7 years ago
- [NAACL(2019)] Generating Knowledge Graph Paths from Textual Definitions using Sequence-to-Sequence Models☆11Apr 27, 2022Updated 4 years ago
- 🎬 analyzing three decades of movie data☆14Dec 9, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- a customzable pipeline for information extraction☆18Mar 23, 2026Updated 4 months ago
- Minimal Named-Entity Recognizer (MER)☆58Sep 18, 2025Updated 10 months ago
- Create playlists in Spotify using Python, libspotify, and pyspotify.☆19Dec 13, 2013Updated 12 years ago
- ☆14Apr 13, 2026Updated 3 months ago
- A Silver Standard Corpus of Human Phenotype-Gene Relations☆13Oct 6, 2022Updated 3 years ago
- Vancouver Event and Relation System for Extraction☆11Nov 9, 2017Updated 8 years ago
- code for DOMI☆12Mar 24, 2023Updated 3 years ago
- BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction☆27Nov 30, 2023Updated 2 years ago
- Command line tool to predict phenotype from VCF (gets models from pheno-server-21)☆16Jan 1, 2016Updated 10 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Tools for working with the S800 corpus☆12Sep 17, 2020Updated 5 years ago
- Get literature information via PubMed ID, such as the author, title, journal_name, pub_date and so on.☆17Sep 11, 2016Updated 9 years ago
- Codes for NLPDove at SemEval 2020 Task 6: OffensEval, COLING 2020☆10Apr 3, 2020Updated 6 years ago
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆347Nov 9, 2021Updated 4 years ago
- High-performance tool for negation and uncertainty detection in radiology reports☆16May 3, 2024Updated 2 years ago
- ☆14May 22, 2023Updated 3 years ago
- Multitask Learning with Pretrained Transformers☆41Mar 20, 2021Updated 5 years ago
- Biologically RElevant VIrtual Staining☆12Dec 10, 2021Updated 4 years ago
- Simple interface to BioMart (Python -> rpy2 -> R/BioConductor's biomaRt)☆16May 21, 2014Updated 12 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Semantic Similarity Measures using Disjunctive Shared Information☆26Oct 3, 2025Updated 10 months ago
- Source implementation and pointer to pre-trained models for Chexpert++, a BERT-based approximation to CheXpert for radiology report label…☆20Jul 3, 2020Updated 6 years ago
- ☆12Jul 23, 2023Updated 3 years ago
- - part-of-speech tagging, shallow parsing, and named entity recognition for biomedical text -☆23Sep 7, 2010Updated 15 years ago
- A Deep Learning Model for Protein Function Prediction☆18Jul 31, 2020Updated 6 years ago
- hugginface albert model and its tokenizer☆15Mar 12, 2020Updated 6 years ago
- Keras Callback to Automatically Adjust the learning rate when it stops improving☆16Jul 23, 2019Updated 7 years ago