Python library for work with BioCreative files
☆13Mar 28, 2018Updated 8 years ago
Alternatives and similar repositories for PyBioC
Users that are interested in PyBioC are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tool that converts between BioC XML files and BioC JSON files☆19Jan 10, 2017Updated 9 years ago
- Data structures and code to read/write BioC XML and Json.☆34Aug 21, 2023Updated 2 years ago
- Mark2Cure allows anyone that can read English, regardless of background, to help in the process of biomedical discovery.☆14Jan 11, 2023Updated 3 years ago
- Python library for working with BioC files☆13Mar 28, 2018Updated 8 years ago
- Retrieve and process PubTator annotations☆44Aug 10, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Classifying Relations via Long Short-Term Memory Networks along Biomedical Ontologies☆15Feb 15, 2023Updated 3 years ago
- a customzable pipeline for information extraction☆17Mar 23, 2026Updated 2 months ago
- CMOD Wikidata App built on Django Framework for editing Wikidata with existing GeneWIki bot code☆12Feb 3, 2017Updated 9 years ago
- A new web-based HTML5 genome browser. Genome Maps can also browse BAM and VCFs files among other formats.☆27Sep 24, 2013Updated 12 years ago
- Vancouver Event and Relation System for Extraction☆11Nov 9, 2017Updated 8 years ago
- Minimal Named-Entity Recognizer (MER)☆58Sep 18, 2025Updated 8 months ago
- BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction☆27Nov 30, 2023Updated 2 years ago
- Medical concept normalisation using neural networks published in ACL 2016☆10Dec 10, 2016Updated 9 years ago
- Tools for working with the S800 corpus☆12Sep 17, 2020Updated 5 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆24May 16, 2023Updated 3 years ago
- Extracting biomedical relationships from literature with Snorkel 🏊☆58Feb 1, 2021Updated 5 years ago
- ☆24Mar 1, 2023Updated 3 years ago
- neural joint model for entity and relation extraction☆26Apr 8, 2017Updated 9 years ago
- Codes for NLPDove at SemEval 2020 Task 6: OffensEval, COLING 2020☆10Apr 3, 2020Updated 6 years ago
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆344Nov 9, 2021Updated 4 years ago
- For icibm paper☆11Feb 23, 2017Updated 9 years ago
- High-performance tool for negation and uncertainty detection in radiology reports☆16May 3, 2024Updated 2 years ago
- ☆14May 22, 2023Updated 3 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Multitask Learning with Pretrained Transformers☆40Mar 20, 2021Updated 5 years ago
- Biologically RElevant VIrtual Staining☆12Dec 10, 2021Updated 4 years ago
- Semantic Similarity Measures using Disjunctive Shared Information☆25Oct 3, 2025Updated 8 months ago
- ☆12Jul 23, 2023Updated 2 years ago
- Source implementation and pointer to pre-trained models for Chexpert++, a BERT-based approximation to CheXpert for radiology report label…☆20Jul 3, 2020Updated 5 years ago
- - part-of-speech tagging, shallow parsing, and named entity recognition for biomedical text -☆23Sep 7, 2010Updated 15 years ago
- Evaluation of Deep Learning Strategies for Nucleus Segmentation in Fluorescence Images☆14Feb 4, 2019Updated 7 years ago
- ☆29Feb 23, 2026Updated 3 months ago
- hugginface albert model and its tokenizer☆15Mar 12, 2020Updated 6 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Command line tools for CMDB varaints browser☆23May 14, 2024Updated 2 years ago
- Code for ASE'21 paper "AID: Efficient Prediction of Aggregated Intensity of Dependency in Large-scale Cloud Systems"☆15Nov 2, 2021Updated 4 years ago
- This repo is used to release code that is generated by the AI Horizons Network as needed to supplement conference papers and workshops.☆18Jun 21, 2022Updated 3 years ago
- Keras Callback to Automatically Adjust the learning rate when it stops improving☆16Jul 23, 2019Updated 6 years ago
- Intelligent Word Embeddings of Free-Text Radiology Reports☆24Dec 8, 2018Updated 7 years ago
- Second place solution of WSDM Cup 2019☆18Mar 15, 2019Updated 7 years ago
- Static Double Array Trie (DASTrie)☆31Feb 3, 2012Updated 14 years ago