Python library for work with BioCreative files
☆13Mar 28, 2018Updated 8 years ago
Alternatives and similar repositories for PyBioC
Users that are interested in PyBioC are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tool that converts between BioC XML files and BioC JSON files☆19Jan 10, 2017Updated 9 years ago
- Data structures and code to read/write BioC XML and Json.☆34Aug 21, 2023Updated 3 years ago
- This is the open source repository of my Recursive Neural Network for the BioCreative 6 track5 - chemprot task.☆11Feb 22, 2019Updated 7 years ago
- Mark2Cure allows anyone that can read English, regardless of background, to help in the process of biomedical discovery.☆14Jan 11, 2023Updated 3 years ago
- Python library for working with BioC files☆13Mar 28, 2018Updated 8 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- MIC-CIS entry in PharmaCoNER, Bacteria Biotope (BB 2029) & SeeDev 2019 Shared Tasks in EMNLP '19☆11Feb 22, 2020Updated 6 years ago
- Retrieve and process PubTator annotations☆44Aug 10, 2023Updated 3 years ago
- ☆39Nov 16, 2020Updated 5 years ago
- We release Open Meditron, a fully open, clinician-audited medical training corpus and evaluation protocol that closes the open-vs-closed …☆17Aug 3, 2026Updated 3 weeks ago
- [NAACL(2019)] Generating Knowledge Graph Paths from Textual Definitions using Sequence-to-Sequence Models☆11Apr 27, 2022Updated 4 years ago
- 🎬 analyzing three decades of movie data☆14Dec 9, 2022Updated 3 years ago
- NLM .nxml to text format conversion☆24Apr 19, 2015Updated 11 years ago
- a customzable pipeline for information extraction☆18Mar 23, 2026Updated 5 months ago
- CMOD Wikidata App built on Django Framework for editing Wikidata with existing GeneWIki bot code☆12Feb 3, 2017Updated 9 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Minimal Named-Entity Recognizer (MER)☆58Sep 18, 2025Updated 11 months ago
- Create playlists in Spotify using Python, libspotify, and pyspotify.☆19Dec 13, 2013Updated 12 years ago
- ☆14Updated this week
- A Silver Standard Corpus of Human Phenotype-Gene Relations☆13Oct 6, 2022Updated 3 years ago
- Announcements related to ontology changes that may impact groups using GO, such as obsoletions, merges, etc.☆16Nov 22, 2022Updated 3 years ago
- Vancouver Event and Relation System for Extraction☆11Nov 9, 2017Updated 8 years ago
- BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction☆27Nov 30, 2023Updated 2 years ago
- Repo for ACL2023 paper "Won't Get Fooled Again: Answering Questions with False Premises"☆23Jun 11, 2023Updated 3 years ago
- Tools for working with the S800 corpus☆12Sep 17, 2020Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Extracting biomedical relationships from literature with Snorkel 🏊☆58Feb 1, 2021Updated 5 years ago
- neural joint model for entity and relation extraction☆26Apr 8, 2017Updated 9 years ago
- End-to-end training of Retrieval-Augmented LMs (REALM, RAG)☆23Nov 22, 2023Updated 2 years ago
- Codes for NLPDove at SemEval 2020 Task 6: OffensEval, COLING 2020☆10Apr 3, 2020Updated 6 years ago
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆346Nov 9, 2021Updated 4 years ago
- Repository for the paper "RTP-LX: Can LLMs Evaluate Toxicity in Multilingual Scenarios?"☆29May 1, 2025Updated last year
- High-performance tool for negation and uncertainty detection in radiology reports☆16May 3, 2024Updated 2 years ago
- Multitask Learning with Pretrained Transformers☆41Mar 20, 2021Updated 5 years ago
- Biologically RElevant VIrtual Staining☆12Dec 10, 2021Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Command line tools for CMDB varaints browser☆23May 14, 2024Updated 2 years ago
- Simple interface to BioMart (Python -> rpy2 -> R/BioConductor's biomaRt)☆16May 21, 2014Updated 12 years ago
- Source implementation and pointer to pre-trained models for Chexpert++, a BERT-based approximation to CheXpert for radiology report label…☆20Jul 3, 2020Updated 6 years ago
- Intelligent Word Embeddings of Free-Text Radiology Reports☆24Dec 8, 2018Updated 7 years ago
- Evaluation of Deep Learning Strategies for Nucleus Segmentation in Fluorescence Images☆14Feb 4, 2019Updated 7 years ago
- A Deep Learning Model for Protein Function Prediction☆18Jul 31, 2020Updated 6 years ago
- hugginface albert model and its tokenizer☆15Mar 12, 2020Updated 6 years ago