ncbi / BioConceptVecLinks
β41Updated 5 years ago
Alternatives and similar repositories for BioConceptVec
Users that are interested in BioConceptVec are comparing it to the libraries listed below
Sorting:
- Retrieve and process PubTator annotationsβ44Updated 2 years ago
- Extracting biomedical relationships from literature with Snorkel πβ58Updated 4 years ago
- Data structures and code to read/write BioC XML and Json.β32Updated 2 years ago
- a module to calculate the MeSH similarityβ26Updated 4 years ago
- Literature mining for T cell relationsβ23Updated 3 years ago
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://giβ¦β45Updated 3 years ago
- A framework for keeping biomedical text mining result up-to-dateβ42Updated 5 years ago
- Repository for student projects within biomedical text mining from Lund Universityβ56Updated 2 years ago
- β22Updated 2 years ago
- Hetnets in Python (relocated from dhimmel/hetio)β99Updated last month
- PubMedPortable automatically builds a PostgreSQL relational database schema and a Xapian full text index on PubMed XML files as well as iβ¦β26Updated 7 years ago
- Tool that converts between BioC XML files and BioC JSON filesβ18Updated 8 years ago
- Python library for working with BioC filesβ13Updated 7 years ago
- Batch download articles based on PMID (Pubmed ID)β129Updated last year
- a module to calculate the MeSH similarityβ26Updated 3 years ago
- β24Updated 4 years ago
- This repository contains the corpora and supplementary data, along with instructions for recreating the experiments, for our paper: "Towaβ¦β15Updated 6 years ago
- Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work β¦β102Updated 5 years ago
- β70Updated 3 years ago
- Python library for work with BioCreative filesβ13Updated 7 years ago
- Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposingβ32Updated 8 years ago
- Bioformer: an efficient BERT model for biomedical text miningβ55Updated 2 years ago
- β55Updated 5 years ago
- Grounding of biomedical named entities with contextual disambiguationβ44Updated 2 months ago
- β14Updated 3 years ago
- PubMed Mapper: A Python library that map PubMed XML to Python objectβ46Updated 2 years ago
- A project to capture biological pathway data from academic papersβ29Updated 6 months ago
- Cataloging pharmacotherapies in clinical trial from ClinicalTrials.govβ27Updated 9 years ago
- Biomedical wordlists (of drugs, genes, etc) for several text mining projectsβ18Updated 2 years ago
- Provided files are a partial extraction of the Orphanet knowledge base on Rare Diseasesβ51Updated 2 months ago