Python library for working with BioC files
☆13Mar 28, 2018Updated 8 years ago
Alternatives and similar repositories for PyBioC
Users that are interested in PyBioC are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Data structures and code to read/write BioC XML and Json.☆34Aug 21, 2023Updated 2 years ago
- Tool that converts between BioC XML files and BioC JSON files☆19Jan 10, 2017Updated 9 years ago
- Python library for work with BioCreative files☆13Mar 28, 2018Updated 8 years ago
- Playing with the API for ClinicalTrials.gov and LillyCOI☆14Jul 28, 2014Updated 11 years ago
- BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction☆27Nov 30, 2023Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ML-Net is a novel end-to-end deep learning framework for multi-label classification of biomedical tasks. ML-Net combines the label predic…☆36Dec 23, 2019Updated 6 years ago
- Explore the Plant Trait Ontology on the Planteome site.☆47Apr 22, 2026Updated last month
- Code for the paper "BIOLITMAP: a web-based geolocated and temporal visualization of the evolution of bioinformatics publications" in Oxfo…☆21May 3, 2019Updated 7 years ago
- Tools for working with the S800 corpus☆12Sep 17, 2020Updated 5 years ago
- ☆33Nov 30, 2023Updated 2 years ago
- ☆39Nov 16, 2020Updated 5 years ago
- ☆23Updated this week
- BioFLAIR: Pretrained Pooled Contextualized Embeddings for Biomedical Sequence Labeling Tasks☆42May 31, 2020Updated 6 years ago
- A library to create lore plots (logistic regression of the prevalence of a categorical variable in function of a continuous feature)☆18Jun 2, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Pytorch Implementation for "Preserving Linear Separability in Continual Learning by Backward Feature Projection" (CVPR 2023)☆19Jun 29, 2023Updated 2 years ago
- Principal component analysis plugin for D3.js☆10Aug 20, 2017Updated 8 years ago
- ☆44May 17, 2025Updated last year
- Biologically RElevant VIrtual Staining☆12Dec 10, 2021Updated 4 years ago
- 16S pipeline using qiime2 created with snakemake☆12May 21, 2026Updated 2 weeks ago
- A paper list for box embeddings☆17Jun 9, 2021Updated 5 years ago
- This is the open source repository of my Recursive Neural Network for the BioCreative 6 track5 - chemprot task.☆11Feb 22, 2019Updated 7 years ago
- code repo for TACL 2020 paper "Improving Candidate Generation for Low-resource Cross-lingual Entity Linking"☆17Apr 21, 2023Updated 3 years ago
- Noise Reduction Methods for Distantly Supervised Biomedical Relation Extraction☆11Oct 25, 2017Updated 8 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Python library (C++ backend) for degree-preserving network randomization☆14Oct 14, 2019Updated 6 years ago
- ☆12Jul 23, 2023Updated 2 years ago
- Statistical analysis of dissolved organic matter based on high-resolution mass spectrometry☆19Apr 15, 2026Updated last month
- The Systems Biology Ontology (SBO) is a set of controlled, relational vocabularies of terms commonly used in Systems Biology, and in part…☆12May 16, 2023Updated 3 years ago
- [NeurIPS 2025] Official implementation of "Instance-Level Composed Image Retrieval".☆53Dec 22, 2025Updated 5 months ago
- ARCHIVED: this has been folded into the owlapi☆11Oct 27, 2020Updated 5 years ago
- Evaluation of Deep Learning Strategies for Nucleus Segmentation in Fluorescence Images☆14Feb 4, 2019Updated 7 years ago
- Continuous administration of the Greene Lab's electronic scrum☆13Updated this week
- OWLTools☆115Sep 9, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- An information extraction system for free-text eligibility criteria☆38Jan 12, 2019Updated 7 years ago
- This is an integration layer that sits between Whoosh and Django so that full-text searching can be not only possible within any Django p…☆22Sep 1, 2017Updated 8 years ago
- Code for RNA-seq gene coexpression analysis☆10Dec 23, 2021Updated 4 years ago
- Keras Callback to Automatically Adjust the learning rate when it stops improving☆16Jul 23, 2019Updated 6 years ago
- with ArtWork you can Download and Search over 12,000 beautiful, high-resolution artworks famous paintings, sculptures, and architectural …☆13Aug 2, 2025Updated 10 months ago
- In-BoXBART: Get Instructions into Biomedical Multi-task Learning☆15Aug 23, 2022Updated 3 years ago
- KAN (Kolmogorov–Arnold Networks) in the MLX framework for Apple Silicon☆31Jun 18, 2025Updated 11 months ago