ncbi-nlp / PhenoTaggerLinks
PhenoTagger
☆64Updated last year
Alternatives and similar repositories for PhenoTagger
Users that are interested in PhenoTagger are comparing it to the libraries listed below
Sorting:
- A combined deep learning tool for automated recognition of human phenotype ontology☆27Updated 2 years ago
- ☆29Updated 8 months ago
- Phenotype-based Diagnosis Tool for Rare Diseases☆11Updated 6 months ago
- A full-text article retrieval pipeline for biomedical literature.☆21Updated 2 months ago
- Identification of Human Phenotype Entities☆11Updated 7 years ago
- ☆20Updated 2 years ago
- Data structures and code to read/write BioC XML and Json.☆32Updated 2 years ago
- AIONER☆62Updated last year
- Repository for the GA4GH phenopacket schema☆90Updated last week
- OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies☆91Updated 2 years ago
- RENET2: High-Performance Full-text Gene-Disease Relation Extraction with Iterative Training Data Expansion☆29Updated 3 years ago
- ☆24Updated 4 years ago
- ☆27Updated 2 years ago
- Ontology for the description of human clinical features☆325Updated this week
- Provided files are a partial extraction of the Orphanet knowledge base on Rare Diseases☆52Updated 4 months ago
- The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.☆81Updated last month
- ☆32Updated 10 months ago
- Collections of GA4GH phenopackets that represent individuals with Mendelian diseases.☆28Updated this week
- ☆31Updated last year
- PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models☆195Updated last year
- Mondo Disease Ontology☆278Updated this week
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub☆32Updated last year
- A Python library to work with, analyze, filter and inspect the Human Phenotype Ontology☆28Updated 8 months ago
- Public release of the DeepPhe analytic software☆30Updated 2 months ago
- Github repo for the Experimental Factor Ontology (EFO)☆61Updated this week
- Python library for working with BioC files☆13Updated 7 years ago
- Tool that converts between BioC XML files and BioC JSON files☆18Updated 8 years ago
- Retrieve and process PubTator annotations☆44Updated 2 years ago
- Python script that downloads all pubmed abstracts corresponding to user-specified keyword searches, by performing automated NCBI E-utilit…☆32Updated 5 years ago
- ☆22Updated 2 years ago