PhenoTagger
☆66Jan 24, 2024Updated 2 years ago
Alternatives and similar repositories for PhenoTagger
Users that are interested in PhenoTagger are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆33Mar 15, 2025Updated last year
- Phenotype-based Diagnosis Tool for Rare Diseases☆13Mar 2, 2026Updated 5 months ago
- A combined deep learning tool for automated recognition of human phenotype ontology☆27Nov 29, 2022Updated 3 years ago
- ☆33Nov 30, 2023Updated 2 years ago
- ☆35Jan 11, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆14Dec 13, 2023Updated 2 years ago
- ☆25Apr 16, 2021Updated 5 years ago
- This is the repository for the Python based program for automated deep phenotype analysis of clinical information using large language mo…☆31Sep 30, 2025Updated 10 months ago
- First pass at a thin wrapper around the Monarch API and ChatGPT plugin☆12Mar 21, 2025Updated last year
- A near real-time named-entity recognizer☆66Aug 3, 2026Updated last week
- ☆24Nov 30, 2020Updated 5 years ago
- ☆12Jun 19, 2026Updated last month
- A python library for calculating semantic similarity between patients in N3C☆14Oct 5, 2022Updated 3 years ago
- Identification of Human Phenotype Entities☆11Nov 2, 2018Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Basic UPD caller☆12Aug 23, 2021Updated 4 years ago
- RDF Tables in Rust☆17Aug 26, 2022Updated 3 years ago
- Collections of GA4GH phenopackets that represent individuals with Mendelian diseases.☆39Aug 7, 2026Updated last week
- FLT3-ITD script based on in-silico extension and clustering☆14Jun 9, 2021Updated 5 years ago
- Clinical machine-learning based interpreter of germline mutations.☆11Mar 13, 2025Updated last year
- Ontology Access Kit: A python library and command line application for working with ontologies☆193Aug 8, 2026Updated last week
- AIONER☆70Jul 25, 2024Updated 2 years ago
- ✖️MEN - A Modular Toolkit for Cross-Lingual Medical Entity Normalization☆32Dec 28, 2024Updated last year
- Text-mined knowledgebase for drivers, oncogenes and tumor suppressors in cancer☆42Dec 16, 2025Updated 7 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Python library for working with BioC files☆13Mar 28, 2018Updated 8 years ago
- ACL'2020: Biomedical Entity Representations with Synonym Marginalization☆185Jul 7, 2023Updated 3 years ago
- A collection of useful python functions for looking up information and working with the Biolink Model☆25Updated this week
- Facial analysis framework for genetic disorders with facial dysmorphism☆14Mar 19, 2026Updated 4 months ago
- Phylogeny-based Contamination Detection in Mitochondrial and Whole-Genome Sequencing Studies☆17Jun 14, 2023Updated 3 years ago
- Customizable translation of OBO graphs to dot for visualization using graphviz and other tools☆26Feb 21, 2025Updated last year
- REEV: Explanation and Evaluation of Variants☆11Apr 27, 2026Updated 3 months ago
- High-performance tool for negation and uncertainty detection in radiology reports☆169Jul 16, 2023Updated 3 years ago
- phenol: Phenotype ontology library☆26Jun 30, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆24Jul 29, 2025Updated last year
- Grounding of biomedical named entities with contextual disambiguation☆54Jun 29, 2026Updated last month
- Ontology for the description of human clinical features☆370Updated this week
- VarFish: comprehensive DNA variant analysis for diagnostics and research☆53Updated this week
- Expanded STR algorithm for Illumina sequencing data☆24Sep 11, 2022Updated 3 years ago
- FastContext is an optimized Java implementation of ConText algorithm (https://www.ncbi.nlm.nih.gov/pubmed/23920642).☆14Oct 19, 2021Updated 4 years ago
- SVsim: a tool that generates synthetic Structural Variant calls as benchmarks to test/evaluate SV calling pipelines.☆18Dec 4, 2017Updated 8 years ago