LHNCBC / SemRepLinks
☆70Updated 3 years ago
Alternatives and similar repositories for SemRep
Users that are interested in SemRep are comparing it to the libraries listed below
Sorting:
- a module to calculate the MeSH similarity☆27Updated 4 years ago
- Data structures and code to read/write BioC XML and Json.☆33Updated 2 years ago
- a module to calculate the MeSH similarity☆26Updated 4 years ago
- Grounding of biomedical named entities with contextual disambiguation☆45Updated this week
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically☆41Updated last year
- PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models☆196Updated last year
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…☆45Updated 3 years ago
- The symptom ontology was designed around the guiding concept of a symptom being: “A perceived change in function, sensation or appearance…☆44Updated last year
- A near real-time named-entity recognizer☆62Updated 4 months ago
- BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction☆27Updated 2 years ago
- Bio relation extraction labeled dataset☆45Updated 3 years ago
- ☆131Updated 2 years ago
- Text annotation tool for team collaboration☆43Updated last year
- Turning Ontologies Plus Annotation Properties into Vectors☆35Updated 5 years ago
- ☆55Updated 5 years ago
- Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.☆41Updated 5 years ago
- Knowledge graphs generation from unstructured text.☆71Updated 10 months ago
- Retrieve and process PubTator annotations☆44Updated 2 years ago
- Medical Relations and Entities Extraction☆37Updated 3 years ago
- Health knowledge graph for 157 diseases and 491 symptoms, learned from >270,000 patients' data☆104Updated 5 years ago
- Ontology Tutorial☆73Updated 3 years ago
- Public release of the DeepPhe analytic software☆30Updated last week
- Extracting biomedical relationships from literature with Snorkel 🏊☆58Updated 4 years ago
- Build system for the RTX-KG2pre biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)☆52Updated 3 weeks ago
- Python library for working with BioC files☆13Updated 7 years ago
- a customzable pipeline for information extraction☆18Updated 6 months ago
- A Serverless Text Annotation Tool for Corpus Development☆57Updated 9 months ago
- COVID-19 Knowledge Graph: a computable, multi-modal, cause-and-effect knowledge model of COVID-19 pathophysiology☆43Updated 4 years ago
- ☆76Updated last year
- ☆152Updated 2 years ago