ncbi / AIONERLinks
AIONER
☆62Updated last year
Alternatives and similar repositories for AIONER
Users that are interested in AIONER are comparing it to the libraries listed below
Sorting:
- ☆29Updated 2 years ago
- ☆32Updated 2 years ago
- Data structures and code to read/write BioC XML and Json.☆33Updated 2 years ago
- PhenoTagger☆64Updated 2 years ago
- ☆41Updated 8 months ago
- BERN2: an advanced neural biomedical namedentity recognition and normalization tool☆201Updated last year
- a module to calculate the MeSH similarity☆26Updated 4 years ago
- a module to calculate the MeSH similarity☆27Updated 4 years ago
- A Python package to download full article PDFs from OA publications☆53Updated last year
- Python toolkit for NCBI metadata (via eutils) and pubmed article text mining -- official primary repo.☆142Updated 5 months ago
- SHEPHERD: Few shot learning for phenotype-driven diagnosis of patients with rare genetic diseases☆77Updated 7 months ago
- ☆24Updated 5 years ago
- Build PharMeBINet from different sources.☆20Updated 2 weeks ago
- PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models☆200Updated last year
- a customzable pipeline for information extraction☆18Updated 8 months ago
- Python library for working with BioC files☆13Updated 7 years ago
- Grounding of biomedical named entities with contextual disambiguation☆47Updated 3 weeks ago
- Retrieve and process PubTator annotations☆44Updated 2 years ago
- A combined deep learning tool for automated recognition of human phenotype ontology☆27Updated 3 years ago
- Provided files are a partial extraction of the Orphanet knowledge base on Rare Diseases☆53Updated last month
- Biomedical Named Entity Recognition and Normalization of Diseases, Chemicals and Genenetic entity classes through the use of state-of-the…☆123Updated 4 years ago
- Build system for the RTX-KG2pre biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)☆55Updated 2 weeks ago
- Expert-Curated Oncology Reports to Advance Language Model Inference☆31Updated last year
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically☆41Updated last year
- A specialized LLM for study search, study screening, and data extraction from medical literature.☆26Updated 10 months ago
- Collection of tutorials to build RNA-KG v2.0 from scratch and for reproducing experiments such as "context-aware" KG pruning, clustering,…☆28Updated 4 months ago
- Code for MedCPT, a model for zero-shot biomedical information retrieval.☆227Updated last year
- ☆70Updated 3 years ago
- Biomedical Entity Linking Benchmark☆14Updated last year
- RENET2: High-Performance Full-text Gene-Disease Relation Extraction with Iterative Training Data Expansion☆29Updated 4 years ago