rigdenlab / conkit
Contact Prediction ToolKit
☆22Updated 2 years ago
Alternatives and similar repositories for conkit:
Users that are interested in conkit are comparing it to the libraries listed below
- 📦 A Command Line Tool for downloading protein structures, sequences and MSAs☆10Updated 7 years ago
- A platform to do RNA science☆27Updated 4 years ago
- Structural Bioinformatics Training Workshop & Hackathon 2017☆19Updated 7 years ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆54Updated last month
- pdbx is a parser module in python for structures of the protein data bank in the mmcif format☆26Updated 8 months ago
- The Swiss Army knife for carbohydrate structure validation, refinement and analysis☆29Updated 2 weeks ago
- Evolutionary conservation estimation of residues or nucleotides☆41Updated 3 years ago
- Contact map alignment☆41Updated 4 years ago
- Python package to manage protein structures and their annotations☆42Updated last year
- A Python platform for Structural Bioinformatics☆56Updated last month
- scripts and facilities for in-silico mutagenesis with FoldX☆56Updated 4 months ago
- ☆85Updated last year
- A Python workflow to study protein-protein coevolution and interaction☆21Updated 7 years ago
- Contact map alignment☆16Updated 6 years ago
- analyse PDB files, run molecular-dynamics & analyse trajectories☆61Updated 7 years ago
- PSIPRED Protein Secondary Structure Predictor☆54Updated 5 months ago
- Interactive Python notebooks for PDBe API training☆52Updated 3 months ago
- Python implementation of the Ramachandran plot☆45Updated 5 years ago
- PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.☆23Updated last year
- Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix☆35Updated 2 years ago
- Dynamics PyMOL Plugin☆42Updated last year
- A wxPython graphical interface for the PyRosetta and Rosetta protein modeling suites☆29Updated 6 years ago
- Fast protein domain structure embedding+search tool☆18Updated last month
- ☆20Updated 3 years ago
- Python framework for doing ancestral sequence reconstruction☆38Updated 9 months ago
- PDBe Programming Interfaces information☆14Updated 6 years ago
- Control PyMOL sessions via IPython☆58Updated 2 years ago
- A domain parser for Alphafold models☆36Updated last year
- Pseudo Likelihood Maximization for protein in Julia☆51Updated 3 months ago
- A web app to convert a PyMOL PSE file or PDB file to a easy to implement NGL.js view that can be implemented easily on any site☆12Updated 3 years ago