Bioinformatic Application for Quantification and LAbeling of VirAl taxonomy
☆18Oct 30, 2026Updated this week
Alternatives and similar repositories for baqlava
Users that are interested in baqlava are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- symbiont classifier☆25Sep 21, 2026Updated last month
- Protologgger is a tool for the description of novel taxa by providing taxonomic, functional and ecological insights☆17Nov 24, 2025Updated 11 months ago
- PlasRAG is a deep learning-based tool specifically designed for analyzing plasmids, which serves two purposes: (1) plasmid property chara…☆10Dec 24, 2025Updated 10 months ago
- Local version of the virus identification and analysis web server (tool set)☆122Oct 13, 2026Updated 2 weeks ago
- Pilea: profiling bacterial growth dynamics from metagenomes with sketching☆13Oct 21, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- The viral taxonomic assignment pipeline☆47Aug 31, 2026Updated 2 months ago
- A tool to assemble high-quality phages from metagenomes.☆28Sep 10, 2026Updated last month
- Metagenome Clustering and Association Tool.☆29Sep 22, 2026Updated last month
- ☆14Jun 1, 2026Updated 4 months ago
- PlasMAAG is a tool to recover plasmids and organisms from metagenomic samples☆33Sep 1, 2026Updated last month
- tyPPing and other methods for detecting phage-plasmids☆14Dec 18, 2025Updated 10 months ago
- ☯️🧬 Refined and Overlapped Binning of Metagenomic Contigs Using Assembly Graphs☆37Oct 24, 2025Updated last year
- A pipeline for the identification of fungi in public metagenomics datasets☆18Nov 23, 2020Updated 5 years ago
- ☆19Jun 12, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Automated discovery and curation of Auxiliary Metabolic Genes (AMGs), Auxiliary Regulatory Genes (AReGs), and Auxiliary Physiology Genes …☆24Updated this week
- Integrative virome pipeline☆14Nov 4, 2024Updated last year
- VirID: An integrated platform for the discovery and characterization of RNA Viruses☆26Jan 8, 2026Updated 9 months ago
- Virus Protein Structural Analysis Toolkit☆15Sep 9, 2024Updated 2 years ago
- Alignment-Free Taxonomic Classification Deep Learning Model☆17Apr 8, 2026Updated 6 months ago
- ☆12Nov 12, 2021Updated 4 years ago
- PhaTYP: Predicting lifestyle for bacteriophages using BERT☆19Nov 6, 2024Updated last year
- Leviathan: Fast, memory-efficient, and scalable taxonomic and pathway profiling for (pan)genome-resolved metagenomics and metatranscripto…☆30Updated this week
- Systematic search of all known anti-phage systems.☆188Sep 1, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Miscellaneous functions for metagenomic analysis.☆53May 14, 2026Updated 5 months ago
- A listing of software, tools and databases useful for virome analysis☆95Updated this week
- 💥 k-mer based variant calling and genotyping — sensitive, fast, and easy to use☆22Oct 12, 2026Updated 2 weeks ago
- A python library for predicting phage lifestyle based on genome sequence☆44Aug 9, 2023Updated 3 years ago
- Python package to run DefensePredictor, a machine learning model to identify proteins involved in anti-phage defense☆58Apr 27, 2026Updated 6 months ago
- Utility to analyse a group of closely related MAgs/Genomes/bins/SUBs of more or less dubious origin☆15Sep 24, 2024Updated 2 years ago
- ☆21Oct 23, 2026Updated last week
- Accurate identification of bacteriophages from metagenomic data using Transformer☆21Nov 6, 2024Updated last year
- Discover and annotate the virome☆64Jun 10, 2026Updated 4 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- hecatomb is a virome analysis pipeline for analysis of Illumina sequence data☆61Sep 23, 2025Updated last year
- A tool for visualization of pairwise alignments of multiple sequences☆19Aug 12, 2025Updated last year
- Pharokka is a rapid standardised annotation tool for bacteriophage genomes and metagenomes.☆239Oct 21, 2026Updated last week
- Supporting code for uncultivated gut virus manuscript☆81Jul 17, 2023Updated 3 years ago
- Binning Virus Genomes from Metagenomes☆78Jul 13, 2022Updated 4 years ago
- R Data Exploration for Serratus☆17Mar 29, 2023Updated 3 years ago
- From genomes to phenotypes: Traitar, the microbial trait analyzer☆69Aug 12, 2019Updated 7 years ago