Characterization of Germline variants
☆101Mar 15, 2022Updated 4 years ago
Alternatives and similar repositories for CharGer
Users that are interested in CharGer are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A bioinformatics software tool for clinical interpretation of genetic variants by the 2015 ACMG-AMP guideline☆207May 28, 2023Updated 2 years ago
- Personal Cancer Genome Reporter (PCGR)☆276Updated this week
- ☆44Oct 27, 2018Updated 7 years ago
- ☆24Apr 16, 2026Updated 2 weeks ago
- TAPES : a Tool for Assessment and Prioritisation in Exome Studies☆26Mar 26, 2026Updated last month
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- PAnno is a Pharmacogenomics Annotation tool for clinical genomic testing.☆16Dec 28, 2022Updated 3 years ago
- Cancer Predisposition Sequencing Reporter (CPSR)☆64Updated this week
- A set of tools to annotate VCF files with expression and readcount data☆30Jan 30, 2026Updated 3 months ago
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Dec 8, 2020Updated 5 years ago
- VAPr: A Python package for NoSQL variant data storage, annotation and prioritization☆37Jun 30, 2021Updated 4 years ago
- An ensemble approach to accurately detect somatic mutations using SomaticSeq☆205Updated this week
- ☆29Feb 17, 2021Updated 5 years ago
- identifying mutational significance in cancer genomes☆62Nov 16, 2022Updated 3 years ago
- DRAGEN Tumor/Normal workflow post-processing☆24Sep 18, 2023Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Precision HLA typing from next-generation sequencing data☆215Mar 3, 2026Updated last month
- ☆20Feb 24, 2017Updated 9 years ago
- ☆36Mar 16, 2021Updated 5 years ago
- a lightweight bam file depth statistical tool☆161Sep 13, 2024Updated last year
- Copy number calling and variant classification using targeted short read sequencing☆146Feb 19, 2026Updated 2 months ago
- Microassembly based somatic variant caller for NGS data☆154Jun 23, 2022Updated 3 years ago
- Clinical Variant Annotation Pipeline☆10Apr 21, 2020Updated 6 years ago
- Detection of copy number changes in Germline/Trio/Somatic contexts in NGS data☆93Sep 16, 2025Updated 7 months ago
- Annotates variants in MAF with OncoKB annotation.☆141Feb 19, 2026Updated 2 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- R package designed to simplify structural variant analysis☆74Dec 22, 2021Updated 4 years ago
- Benchmarking of CNV calling tools☆18May 18, 2019Updated 6 years ago
- A mosaic detecting software based on phasing and random forest☆70Dec 8, 2025Updated 4 months ago
- CNV analysis workflow code for the manuscript☆13Jun 22, 2020Updated 5 years ago
- structural variant database software☆48Apr 21, 2026Updated last week
- An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.☆72May 23, 2024Updated last year
- A modular annotation tool for genomic variants☆151Updated this week
- Visualisation and prioritisation of genomic variants from human exome sequencing projects☆13Apr 23, 2019Updated 7 years ago
- Automated ACMG/AMP classification for human variants associated with congenital hearing loss☆11May 14, 2025Updated 11 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Search for activating regulatory variants in the tumor genome☆15Apr 11, 2025Updated last year
- ☆43Feb 9, 2024Updated 2 years ago
- A comprehensive pipeline to analyze and visualize structural variants☆20Jan 28, 2020Updated 6 years ago
- Concordance and contamination estimator for tumor–normal pairs☆60Oct 22, 2024Updated last year
- Analysis of subclonal copy number alterations (CNA) and loss of heterozygosity (LOH) in cancer☆100Apr 20, 2021Updated 5 years ago
- GRIDSS: the Genomic Rearrangement IDentification Software Suite☆283May 21, 2025Updated 11 months ago
- CNV Rapid Aberration Detection And Reporting☆12Mar 2, 2021Updated 5 years ago