ding-lab / CharGerLinks
Characterization of Germline variants
☆98Updated 3 years ago
Alternatives and similar repositories for CharGer
Users that are interested in CharGer are comparing it to the libraries listed below
Sorting:
- Analysis of subclonal copy number alterations (CNA) and loss of heterozygosity (LOH) in cancer☆98Updated 4 years ago
- Somatic copy number analysis using WGS paired end wholegenome sequencing☆72Updated 5 years ago
- identifying mutational significance in cancer genomes☆62Updated 3 years ago
- Microsatellite instability (MSI) detection for tumor only data.☆112Updated last year
- This WDL pipeline implements data pre-processing and initial variant calling according to the GATK Best Practices for germline SNP and In…☆55Updated 5 years ago
- Tumor Mutational Burden☆63Updated 4 months ago
- QDNAseq package for Bioconductor☆53Updated last year
- ☆54Updated 2 years ago
- Burden testing against public controls☆50Updated last year
- Framework to process and call somatic variation from NGS dataset generated using MSK-IMPACT assay