☆13Nov 19, 2021Updated 4 years ago
Alternatives and similar repositories for enformer-pytorch
Users that are interested in enformer-pytorch are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A neural network model to predict splice site usage and splicing-altering mutations☆15Jul 24, 2025Updated 8 months ago
- Snakemake workflow for comparing E-G links to experimental data☆23Mar 9, 2026Updated 2 weeks ago
- Scripts for the analysis of TT-seq and DRB/TT-seq data.☆11Mar 11, 2020Updated 6 years ago
- Machine learning methods for DNA sequence analysis.☆61Feb 27, 2026Updated last month
- Using Git to Code, Collaborate and Share☆14Oct 9, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- ☆12Feb 19, 2021Updated 5 years ago
- The full training script for Enformer - Tensorflow Sonnet☆18Apr 18, 2022Updated 3 years ago
- R package for nucleotide conversion sequencing data analysis☆17Jan 13, 2026Updated 2 months ago
- ☆16May 7, 2023Updated 2 years ago
- ☆14Apr 2, 2024Updated last year
- An R package for detecting Gene-by-Environment (GxE) interaction effects on the transcriptome using Allele Specific Expression quantified…☆22Oct 27, 2021Updated 4 years ago
- A command-line tool for reading SAM/BAM files and converted them directly to bigwig files.☆21Jan 3, 2026Updated 2 months ago
- Implementation of Enformer, Deepmind's attention network for predicting gene expression, in Pytorch☆557Jul 7, 2025Updated 8 months ago
- A short tutorial to using DL and keras for genomics with sequence data.☆15Dec 3, 2020Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- A deep learning approach to predicting transcription initiation from sequence at single nucleotide resolution☆14Feb 24, 2026Updated last month
- Repository for modeling PRO-cap data with the BPNet-like model, ProCapNet.☆20Aug 28, 2025Updated 7 months ago
- This repository hosts a minimal version of a Python API for BPNet.☆56Jan 24, 2026Updated 2 months ago
- LocusCompare is an interactive visualization tool for comparing two genetic association datasets.☆21Apr 8, 2023Updated 2 years ago
- Scripts and notebooks used in Akgol Oksuz et al. paper☆11Jan 18, 2021Updated 5 years ago
- Miniature LIMS and workflow manager for bioinformatics☆41Aug 17, 2011Updated 14 years ago
- ☆12Oct 10, 2024Updated last year
- Transposable element expression at unique loci in single cells with CELLO-seq☆11Jun 17, 2024Updated last year
- Repository for "NucleoBench: A Large-Scale Benchmark of Neural Nucleic Acid Design Algorithms"☆26Mar 13, 2026Updated 2 weeks ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- Generate HTML/SVG Burndown charts from org-mode project data☆18Nov 23, 2015Updated 10 years ago
- Deep learning models to predict enhancers in different Drosophila embryo tissues☆20Dec 10, 2023Updated 2 years ago
- Plotting average TAD heatmap for Hi-C data (give TAD segmentation and cool/hiclib interactions map).☆10Jun 5, 2021Updated 4 years ago
- pipelines to process scRNA-seq data☆12Jan 11, 2021Updated 5 years ago
- Reanalysis of the repressive capacity of promoter DNA methylation☆11Feb 14, 2019Updated 7 years ago
- Modified from spacemacs-light☆13Jan 2, 2018Updated 8 years ago
- Awesome Mathematical Olympiads/Competitions/Contests☆23Jun 7, 2025Updated 9 months ago
- ☆13Sep 30, 2023Updated 2 years ago
- Enformer Celltyping is a tensorflow, multi-headed attention based model that incorporates distal effects of Deoxyribonucleic Acid (DNA) i…☆16Jun 25, 2025Updated 9 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- 机器学习(Machine Learning)、深度学习(Deep Learning)、对抗神经网络(GAN),图神经网络(GNN),NLP,大数据相关的发展路书(roadmap), 并附海量源码(python,pytorch)带大家消化基本知识点,突破面试,完成从新手到合格…☆10Feb 25, 2020Updated 6 years ago
- Automatically create YaSnippets in R☆24Sep 2, 2015Updated 10 years ago
- Implementation of the AIControl paper in Julia 1.0☆17Mar 4, 2019Updated 7 years ago
- Works with Autocuts to automatically turn on Do Not Disturb based on calendar events during your day.☆13Dec 17, 2019Updated 6 years ago
- Modeling Enhancer-Promoter Interactions with Attention-Based Neural Networks☆10Feb 13, 2018Updated 8 years ago
- Software Pipeline for Integrative Genetic Association Analysis: Probabilistic Assessment of Enrichment and Colocalization☆27Oct 29, 2019Updated 6 years ago
- 7C: Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs☆13Oct 15, 2025Updated 5 months ago