☆63Feb 25, 2020Updated 6 years ago
Alternatives and similar repositories for treesne
Users that are interested in treesne are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Regulatory networks with Direct Information in python☆42Mar 9, 2023Updated 3 years ago
- Pathway-based trajectory inference method for time-series scRNAseq data☆26May 18, 2021Updated 5 years ago
- Code for the paper on t-SNE with variable degree of freedom☆25Aug 5, 2020Updated 5 years ago
- An algorithm for mapping cell state transitions.☆28Mar 3, 2023Updated 3 years ago
- Awesome real estate value prediction with machine-learnings.☆15Mar 26, 2019Updated 7 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Create QC and summary reports for Alevin output☆31Jul 21, 2026Updated last week
- Attraction-Repulsion Spectrum in Neighbor Embeddings☆31Sep 24, 2022Updated 3 years ago
- LaTeX template to create a compiled PDF (text+figures) e.g. for bioRxiv.org☆20Apr 19, 2016Updated 10 years ago
- Starter repo for regl explorations☆10May 26, 2017Updated 9 years ago
- A quantitative framework for evaluating data structure preservation by dimensionality reduction techniques☆16Jun 1, 2021Updated 5 years ago
- ☆25Mar 4, 2026Updated 4 months ago
- ☆22Aug 25, 2022Updated 3 years ago
- An R package to construct Elastic Principal Graphs☆24Nov 29, 2019Updated 6 years ago
- Spokesman arXiv papers in Japanese.☆15Jan 5, 2021Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Beta version of 1D t-SNE heatmaps to visualize expression patterns of hundreds of genes simultaneously in scRNA-seq☆48Feb 7, 2019Updated 7 years ago
- DIALOGUE is a dimensionality reduction method that uses cross-cell-type associations to identify multicellular programs (MCPs) and map th…☆123Jan 22, 2024Updated 2 years ago
- R Implementation of FLAME, DAME, and other algorithms in the AME framework☆16Apr 12, 2023Updated 3 years ago
- Examples using Clustergrammer2 to explore high-dimensional datasets.☆40Aug 24, 2020Updated 5 years ago
- Genepy is an open source utils package covering a range of useful functions for large scale genomics data analysis in python☆21May 22, 2023Updated 3 years ago
- inference of transcription factor activity at the single cell level☆28Jul 2, 2026Updated 3 weeks ago
- Exon-Intron Split Analysis (EISA) in R☆17Jul 20, 2026Updated last week
- Code associated with a research project for experimenting with different ways of surfacing stylistic, analytic, or visual discrepancies i…☆14Dec 12, 2024Updated last year
- Monet: An open-source Python package for analyzing scRNA-Seq data using PCA-based latent spaces☆41Sep 17, 2021Updated 4 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆15Feb 7, 2020Updated 6 years ago
- A DSL for layered grammar of interactive graphics in R☆23Apr 30, 2021Updated 5 years ago
- Density-preserving data visualization tools den-SNE and densMAP☆117Apr 27, 2021Updated 5 years ago
- lightgbmのfeature-transform（特徴量の非線形化）をすることで、80,000を超える特徴量を線形回帰でも表現できることを示します☆10Nov 7, 2017Updated 8 years ago
- Biology-driven deep generative model for cell-type annotation in cytometry. Scyan is an interpretable model that also corrects batch-effe…☆46Jul 8, 2026Updated 3 weeks ago
- This is the project for RSNA Intracranial Hemorrhage Detection hosted on Kaggle in 2019.☆13Nov 25, 2019Updated 6 years ago
- Single-cell RNA-seq Gene Expression Recovery☆116Nov 28, 2024Updated last year
- Uncovering cell identity genes using differential stability of expression in single cells.☆15Jun 9, 2026Updated last month
- scMatch: a single-cell gene expression profile annotation tool using reference datasets☆21Aug 11, 2020Updated 5 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Use custom tokenizers in spacy-transformers☆16Aug 9, 2022Updated 3 years ago
- Tidy Tools for Visualizing Mixture Models☆23Jan 6, 2025Updated last year
- Complex Heatmaps Using Base Graphics☆17Mar 29, 2026Updated 4 months ago
- ☆18Feb 24, 2017Updated 9 years ago
- Mutation rate analysis of autosomal loci☆15Jun 25, 2020Updated 6 years ago
- ☆19Oct 27, 2021Updated 4 years ago
- Clone identification from single-cell data☆65Nov 10, 2022Updated 3 years ago