☆63Feb 25, 2020Updated 6 years ago
Alternatives and similar repositories for treesne
Users that are interested in treesne are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Regulatory networks with Direct Information in python☆42Mar 9, 2023Updated 3 years ago
- Pathway-based trajectory inference method for time-series scRNAseq data☆26May 18, 2021Updated 5 years ago
- Distinguishing between generic and experiment-specific gene expression signals.☆12Feb 5, 2023Updated 3 years ago
- Code for the paper on t-SNE with variable degree of freedom☆25Aug 5, 2020Updated 6 years ago
- Awesome real estate value prediction with machine-learnings.☆15Mar 26, 2019Updated 7 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- An algorithm for mapping cell state transitions.☆28Mar 3, 2023Updated 3 years ago
- LaTeX template to create a compiled PDF (text+figures) e.g. for bioRxiv.org☆21Apr 19, 2016Updated 10 years ago
- ☆21Aug 30, 2018Updated 8 years ago
- Beta version of 1D t-SNE heatmaps to visualize expression patterns of hundreds of genes simultaneously in scRNA-seq☆49Feb 7, 2019Updated 7 years ago
- Attraction-Repulsion Spectrum in Neighbor Embeddings☆32Sep 24, 2022Updated 4 years ago
- Descriptive probabilistic marker gene approach to single-cell pseudotime inference☆30Nov 29, 2019Updated 6 years ago
- Starter repo for regl explorations☆10May 26, 2017Updated 9 years ago
- time course regulatory analysis from paired gene expression and chromatin accessibility time course data☆12Nov 10, 2023Updated 2 years ago
- A quantitative framework for evaluating data structure preservation by dimensionality reduction techniques☆16Jun 1, 2021Updated 5 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- An R package to construct Elastic Principal Graphs☆24Nov 29, 2019Updated 6 years ago
- Spokesman arXiv papers in Japanese.☆15Jan 5, 2021Updated 5 years ago
- AnnData for the browser☆14Updated this week
- ☆26Mar 4, 2026Updated 7 months ago
- Codebase for PRESCIENT (Potential eneRgy undErlying Single Cell gradIENTs) for generative modeling of single-cell time-series.☆57Jan 20, 2025Updated last year
- Density-preserving data visualization tools den-SNE and densMAP☆118Apr 27, 2021Updated 5 years ago
- inference of transcription factor activity at the single cell level☆29Jul 2, 2026Updated 3 months ago
- Information-based dimensionality reduction☆30Dec 14, 2024Updated last year
- Examples using Clustergrammer2 to explore high-dimensional datasets.☆40Aug 24, 2020Updated 6 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- MultiSKAT is an R-package focused at rare-variant analysis of continuous multiple phenotype data. This project contains the R-codes/funct…☆13Jun 11, 2019Updated 7 years ago
- Exon-Intron Split Analysis (EISA) in R☆18Aug 27, 2026Updated 2 months ago
- Monet: An open-source Python package for analyzing scRNA-Seq data using PCA-based latent spaces☆41Sep 17, 2021Updated 5 years ago
- A DSL for layered grammar of interactive graphics in R☆23Apr 30, 2021Updated 5 years ago
- Genepy is an open source utils package covering a range of useful functions for large scale genomics data analysis in python☆21May 22, 2023Updated 3 years ago
- Utilities for data science competitions.☆14Dec 19, 2018Updated 7 years ago
- lightgbmのfeature-transform(特徴量の非線形化)をすることで、80,000を超える特徴量を線形回帰でも表現できることを示します☆10Nov 7, 2017Updated 8 years ago
- This is the project for RSNA Intracranial Hemorrhage Detection hosted on Kaggle in 2019.☆13Nov 25, 2019Updated 6 years ago
- scMatch: a single-cell gene expression profile annotation tool using reference datasets☆21Aug 11, 2020Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Breakpointer is a fast algorithm to locate breakpoints of structural variants from single-end reads produced by next-generation sequencin…☆10May 2, 2014Updated 12 years ago
- DIALOGUE is a dimensionality reduction method that uses cross-cell-type associations to identify multicellular programs (MCPs) and map th…☆127Jan 22, 2024Updated 2 years ago
- FlowSense: A Natural Language Interface for Visual Data Exploration within a Dataflow System☆49Sep 6, 2026Updated last month
- Code associated with a research project for experimenting with different ways of surfacing stylistic, analytic, or visual discrepancies i…☆14Dec 12, 2024Updated last year
- ☆10Oct 31, 2021Updated 4 years ago
- Python Wrapper for FIt-SNE☆46May 11, 2021Updated 5 years ago
- Single-cell RNA-seq Gene Expression Recovery☆118Nov 28, 2024Updated last year