Alternatives and similar repositories for revbayes.archive

Users that are interested in revbayes.archive are comparing it to the libraries listed below

• revbayes / revbayes
  Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language
  ☆77Updated this week
• xavierdidelot / TransPhylo
  Reconstruction of transmission trees using genomic data
  ☆69Updated 2 years ago
• rambaut / Seq-Gen
  Sequence simulator
  ☆54Updated 10 months ago
• mdrasmus / argweaver
  Sampling and manipulating genome-wide ancestral recombination graphs (ARGs)
  ☆57Updated 10 years ago
• tgvaughan / MASTER
  A versatile simulation engine for stochastic population dynamics models.
  ☆23Updated 3 years ago
• FePhyFoFum / phyx
  phylogenetics tools for linux (and other mostly posix compliant) computers
  ☆122Updated 11 months ago
• danlwarren / RWTY
  R We There Yet?
  ☆32Updated 9 months ago
• jade-cheng / ohana
  mixture classification, constraint optimization, outlier detection, population structure, admixture history, and selection detection.
  ☆87Updated 4 years ago
• nstenz / TICR
  ☆26Updated 4 years ago
• thednainus / Bayesian_tutorial
  Tutorial on Bayesian phylogenetic analysis
  ☆51Updated 8 years ago
• stamatak / ExaML
  Exascale Maximum Likelihood (ExaML) code for phylogenetic inference using MPI
  ☆50Updated 5 years ago
• beast-dev / tracer
  Posterior summarisation in Bayesian phylogenetics
  ☆66Updated 3 months ago
• biocore / unifrac
  ☆41Updated 2 months ago
• kr-colab / locator
  deep learning prediction of geographic location from individual genome sequences
  ☆52Updated 11 months ago
• 4ment / phylostan
  Phylogenetic inference using Stan
  ☆23Updated 9 months ago
• zhengxwen / SNPRelate
  R package: parallel computing toolset for relatedness and principal component analysis of SNP data (Development version only)
  ☆110Updated 2 months ago
• gchen98 / macs
  Automatically exported from code.google.com/p/macs
  ☆17Updated 6 years ago
• splatlab / squeakr
  Squeakr: An Exact and Approximate k -mer Counting System
  ☆86Updated 10 months ago
• fgvieira / ngsLD
  Calculation of pairwise Linkage Disequilibrium (LD) under a probabilistic framework
  ☆47Updated 2 years ago
• MesserLab / SLiM-Extras
  Extra add-ons that may be useful for people using SLiM, but that are not part of the SLiM project itself
  ☆43Updated last month
• blaxterlab / blobology
  Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assembly data sets as a …
  ☆47Updated 3 years ago
• kr-colab / popvae
  genotype dimensionality reduction with a VAE
  ☆48Updated 9 months ago
• lczech / gappa
  A toolkit for analyzing and visualizing phylogenetic placement data
  ☆62Updated 2 months ago
• artic-network / civet
  Cluster Investigation & Virus Epidemiology Tool
  ☆50Updated 6 months ago
• lczech / genesis
  A library for working with phylogenetic and population genetic data.
  ☆65Updated last month
• drostlab / orthologr
  Genome wide orthology inference and dNdS estimation
  ☆96Updated 3 months ago
• kgori / treeCl
  Clustering phylogenetic trees with python
  ☆26Updated last year
• emmanuelparadis / pegas
  Population and Evolutionary Genetics Analysis System
  ☆29Updated 3 weeks ago
• GATB / simka
  Simka and SimkaMin are comparative metagenomics methods dedicated to NGS datasets.
  ☆51Updated 3 years ago
• gbradburd / conStruct
  method for modeling continuous and discrete population genetic structure
  ☆38Updated last year