Alternatives and similar repositories for helium-docs:

Users that are interested in helium-docs are comparing it to the libraries listed below

• lvclark / polyRAD
  Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝
  ☆28Updated 3 weeks ago
• macroevolution / bamm
  A program for multimodel inference on speciation and trait evolution
  ☆33Updated 7 years ago
• hemstrow / snpR
  ☆30Updated 3 weeks ago
• gbradburd / conStruct
  method for modeling continuous and discrete population genetic structure
  ☆35Updated last year
• bcm-uga / pcadapt
  Performing highly efficient genome scans for local adaptation with R package pcadapt v4
  ☆40Updated 6 months ago
• pgugger / LandscapeGenomics
  Tutorials for bioinformatics and data analysis related to landscape genomics
  ☆27Updated 6 years ago
• jgx65 / hierfstat
  the hierfstat package
  ☆24Updated 4 months ago
• mmollina / MAPpoly
  Genetic maps in autopolyploids
  ☆28Updated 3 weeks ago
• rojaff / LanGen_pipeline
  Suit of R-scripts to perform landscape genomic analyses
  ☆13Updated 4 years ago
• stevemussmann / BayesAss3-SNPs
  Modification of BayesAss 3.0.4 to allow handling of large SNP datasets
  ☆15Updated 3 years ago
• filippob / introduction_to_gwas
  https://filippob.github.io/introduction_to_gwas/
  ☆20Updated 9 months ago
• edgardomortiz / sam2consensus
  Get the consensus sequences from SAM (and BAM) files, ignoring the reference
  ☆10Updated 5 years ago
• augusto-garcia / onemap
  Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…
  ☆37Updated last year
• jendelman / GWASpoly
  GWAS software that can handle autopolyploids
  ☆28Updated 5 months ago
• StevenMicheletti / poolparty
  Whole-genome bioinformatic pipeline for pooled or individual-based NGS data using bash and R
  ☆20Updated 3 years ago
• bcbc-group / Botany2020NMGWorkshop
  A repo for scripts and associated files for the Botany 2020 Virtual Nonmodel Genomics Workshop
  ☆15Updated 4 years ago
• bodkan / admixr
  An R package for reproducible and automated ADMIXTOOLS analyses
  ☆29Updated last month
• nicocriscuolo / StructuRly
  Comprehensive, detailed and interactive plots for STRUCTURE and ADMIXTURE population analysis
  ☆20Updated 4 months ago
• marcomilanesi / BITE
  BITE: BioInformatics tools for everyone
  ☆19Updated 8 months ago
• mighster / BLUPs_Heritability
  ☆16Updated 5 years ago
• dcgerard / updog
  Flexible Genotyping of Polyploids using Next Generation Sequencing Data
  ☆28Updated 5 months ago
• devillemereuil / bayescenv
  BayeScEnv is a Fst-based, genome-scan method that uses environmental variables to detect local adaptation.
  ☆19Updated 7 years ago
• dyerlab / applied_population_genetics
  A textbook on population genetics
  ☆18Updated 3 months ago
• timbeissinger / Maize-Teo-Scripts
  ☆17Updated 9 years ago
• millanek / fineRADstructure
  A package for population structure inference from RAD-seq data
  ☆31Updated 3 years ago
• mijangos81 / PopGenR
  Population Genomics in R workshop
  ☆12Updated last year
• ANGSD / NgsRelate
  ☆43Updated last week
• gbradburd / SpaceMix
  ☆30Updated 2 years ago
• whussain2 / Analysis-pipeline
  ☆34Updated 3 years ago
• mailund / admixture_graph
  Module for analysing admixture graphs
  ☆28Updated 6 years ago