bcbc-group / Botany2020NMGWorkshop
A repo for scripts and associated files for the Botany 2020 Virtual Nonmodel Genomics Workshop
☆15Updated 4 years ago
Alternatives and similar repositories for Botany2020NMGWorkshop:
Users that are interested in Botany2020NMGWorkshop are comparing it to the libraries listed below
- UCE Bioinformatics Pipeline☆15Updated 3 months ago
- ☆17Updated 4 years ago
- This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MA…☆34Updated last year
- Tutorials for bioinformatics and data analysis related to landscape genomics☆26Updated 6 years ago
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆57Updated 4 months ago
- Population assignment analysis using R☆17Updated 3 months ago
- Scripts for population genetics analysis☆19Updated 2 years ago
- Bioinformatic pipeline for processing Sequence Capture data for Phylogenetics☆21Updated last year
- Helper scripts for processing and visualization of phylogenetics datasets☆27Updated last year
- Phylogenetic penalized likelihood☆47Updated 7 months ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆40Updated 5 months ago
- ☆38Updated last year
- Population Genomics in R workshop☆12Updated 11 months ago
- Modification of BayesAss 3.0.4 to allow handling of large SNP datasets☆15Updated 3 years ago
- SambaR: Snp datA Management and Basic Analyses in R☆27Updated 2 weeks ago
- Repository for speciation genomics website☆24Updated 7 months ago
- Get the consensus sequences from SAM (and BAM) files, ignoring the reference☆10Updated 5 years ago
- A package for population structure inference from RAD-seq data☆31Updated 3 years ago
- Automated de novo assembly of whole chloroplast genomes.☆44Updated 5 months ago
- Tutorials on phylogenomic analyses for the ForBio Phylogenomics course☆33Updated 11 months ago
- biodiversity genomics course by Nicol Rueda, Karin Näsvall and Joana Meier from the Wellcome Sanger Institute☆47Updated last month
- Workflow to detect and phase hybrids in target capture data☆18Updated last year
- Leroy & Rougemont - “learning-by-doing” introduction to population genomics - scripts☆19Updated 5 years ago
- A massively parallel tool for model selection and tree inference on thousands of genes☆47Updated 11 months ago
- Detecting natural selection from population-based genetic data☆27Updated 5 years ago
- Whole-genome bioinformatic pipeline for pooled or individual-based NGS data using bash and R☆20Updated 2 years ago
- A tool to infer species tree and phylogenetic network from multilocus data☆32Updated 4 years ago
- An R Package to build and simulate coalescent models☆20Updated 10 months ago
- A statistical framework for ploidy estimation using NGS short-read data☆56Updated 6 years ago
- ☆30Updated 3 years ago