bcbc-group / Botany2020NMGWorkshopLinks
A repo for scripts and associated files for the Botany 2020 Virtual Nonmodel Genomics Workshop
☆15Updated 5 years ago
Alternatives and similar repositories for Botany2020NMGWorkshop
Users that are interested in Botany2020NMGWorkshop are comparing it to the libraries listed below
Sorting:
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆68Updated last month
- Methods for examining PCA locally along the genome.☆86Updated last year
- Automated de novo assembly of whole chloroplast genomes.☆47Updated last year
- ☆18Updated 5 years ago
- biodiversity genomics course by Nicol Rueda, Karin Näsvall, Fernando Seixas and Joana Meier from the Wellcome Sanger Institute☆64Updated 2 weeks ago
- A statistical framework for ploidy estimation using NGS short-read data☆62Updated 7 years ago
- Tutorials for bioinformatics and data analysis related to landscape genomics☆29Updated 6 years ago
- A package for population structure inference from RAD-seq data☆34Updated 4 years ago
- Helper scripts for processing and visualization of phylogenetics datasets☆30Updated last year
- Whole-genome bioinformatic pipeline for pooled or individual-based NGS data using bash and R☆21Updated 3 years ago
- PHYLOgenomic analysis pipeline for HERBarium specimens☆17Updated 7 months ago
- Phylogenetic penalized likelihood☆54Updated 5 months ago
- Detecting natural selection from population-based genetic data☆28Updated 6 years ago
- Repository for speciation genomics website☆27Updated 3 months ago
- deep learning prediction of geographic location from individual genome sequences☆52Updated 10 months ago
- Bioinformatic pipeline for processing Sequence Capture data for Phylogenetics☆24Updated 2 years ago
- Population assignment analysis using R☆15Updated 5 months ago
- method for modeling continuous and discrete population genetic structure☆38Updated last year
- This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MA…☆35Updated 2 years ago
- SambaR: Snp datA Management and Basic Analyses in R☆32Updated last month
- ☆42Updated 2 years ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆43Updated 4 months ago
- Modification of BayesAss 3.0.4 to allow handling of large SNP datasets☆17Updated 3 years ago
- Get the consensus sequences from SAM (and BAM) files, ignoring the reference☆13Updated 6 years ago
- Population genetics analyses from NGS data☆25Updated 4 years ago
- Interim data for the Darwin Tree of Life Project☆33Updated 5 years ago
- microhaplotype visualizer and analyzer☆20Updated 4 years ago
- UCE Bioinformatics Pipeline☆17Updated 2 months ago
- A program for the Maximum-likelihood analysis of population genomic data.☆30Updated 4 years ago
- A bioinformatics package for creating, filtering, and manipulating supermatrices and phylogenetic datasets using GenBank and/or local seq…☆44Updated last year