Scripts for miscelleneous bioinformatics tasks
☆49Jun 5, 2020Updated 6 years ago
Alternatives and similar repositories for bioinformatics-hacks
Users that are interested in bioinformatics-hacks are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆11Sep 16, 2020Updated 6 years ago
- Miscellaneous Bioinformatics scripts etc mostly in Python☆44Sep 7, 2026Updated 2 weeks ago
- Python Algorithms to solve Bioinformatics Problems☆18Jan 9, 2018Updated 8 years ago
- A Pedantic FASTA Parser and Tool Set☆14Apr 22, 2020Updated 6 years ago
- Bioinformatics analysis scripts, workflows, general code examples☆57Feb 19, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Integrating influenza antigenic dynamics with molecular evolution☆12May 28, 2015Updated 11 years ago
- Practical Introduction to Bioinformatics and Systems Biology with R (mainly)☆20Mar 9, 2010Updated 16 years ago
- Burrows-Wheeler Aligner for x86,x86_64, arm and aarch64 architectures (PC, Raspberry PI, ODROID, M1)☆10Apr 13, 2022Updated 4 years ago
- Galaxy tools and wrappers for sequence analysis☆17Jun 11, 2024Updated 2 years ago
- Sample an approximate number of reads from a fastq file without reading the entire file☆11Jun 20, 2017Updated 9 years ago
- Tao Yan's Plot Toolkit☆13Aug 20, 2019Updated 7 years ago
- My collection of light bioinformatics analysis pipelines for specific tasks☆79May 20, 2024Updated 2 years ago
- From genomes to phenotypes: Traitar, the microbial trait analyzer☆69Aug 12, 2019Updated 7 years ago
- de novo virus assembler of Illumina paired reads☆58May 17, 2021Updated 5 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Rapid mining of RNA structure motifs from profiling data.☆15Oct 20, 2021Updated 4 years ago
- Practical, reusable scripts for bioinformatics☆102Feb 12, 2019Updated 7 years ago
- Software for Ontogenic aNalysis of Antibody Repertoires☆19Jun 30, 2026Updated 2 months ago
- Fast Bayesian Hidden Markov Model with Wavelet Compression☆17Jan 24, 2020Updated 6 years ago
- STAT540 Statistical Methods for High Dimensional Biology, January - April 2014☆18Apr 28, 2014Updated 12 years ago
- Publication and sharing with Jupyter notebooks for reproducible research☆10May 10, 2019Updated 7 years ago
- Johns Hopkins University student-led genomics paper discussion group☆13Apr 19, 2020Updated 6 years ago
- R package with motifs for use with chromVAR☆29Nov 17, 2017Updated 8 years ago
- Software for creating and comparing genome fingerprints.☆11Jun 30, 2024Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Scripts, utilities and programs for genomic bioinformatics.☆83Aug 17, 2026Updated last month
- VESPA: Very large-scale Evolutionary and Selective Pressure Analyses☆15Mar 18, 2022Updated 4 years ago
- miscellaneous scripts for bioinformatics/genomics that dont merit their own repo.☆181Nov 26, 2018Updated 7 years ago
- ATAC-seq Pipeline in conjunction with Duygu Ucar & Jacques Banchereau Laboratories☆12Apr 3, 2019Updated 7 years ago
- RNF framework for NGS: simulation of reads, evaluation of mappers, conversion of RNF-compliant data.☆14Nov 10, 2025Updated 10 months ago
- A Sliding Window Approach to Identify Differentially Methylated Regions Based on Whole Genome Bisulfite Sequencing☆14May 22, 2023Updated 3 years ago
- Virus discovery☆18Sep 1, 2026Updated 3 weeks ago
- Assembling the cause of phenotypes and genotypes from NGS data☆29Jun 11, 2020Updated 6 years ago
- Biopsy - the Bioinformatic Optimisation System☆16Nov 1, 2015Updated 10 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆21Feb 15, 2025Updated last year
- Given a set of kmers (fasta format) and a set of sequences (fasta format), this tool will extract the sequences containing the kmers.☆21Oct 20, 2023Updated 2 years ago
- Tools for bioinformatics moved to http://git.genenetwork.org/pjotrp/bioinformatics☆265Apr 12, 2022Updated 4 years ago
- Wrapper for the genoPlotR R package. This wrapper makes phylogeny, genbank files and blast comparisons that is needed for the genoPLotR p…☆14Oct 5, 2021Updated 4 years ago
- A Python3 script for removal of outlier sequences from a multiple sequence alignment (FASTA format).☆10Jul 6, 2026Updated 2 months ago
- Unsorted scripts for bioinformatics☆64Jul 1, 2021Updated 5 years ago
- Automatically exported from code.google.com/p/prank-msa☆41Mar 19, 2026Updated 6 months ago