Alternatives and similar repositories for bioinformatics-hacks:

Users that are interested in bioinformatics-hacks are comparing it to the libraries listed below

• stevetsa / awesome-microbes
  List of computational resources for analyzing microbial sequencing data.
  ☆66Updated last year
• dib-lab / dammit
  just annotate it, dammit!
  ☆89Updated last year
• fls-bioinformatics-core / genomics
  Scripts, utilities and programs for genomic bioinformatics.
  ☆81Updated last week
• kyclark / bioinformatics_primer
  Bioinformatics with Unix, bash, Make, Python, and parallel
  ☆21Updated 4 years ago
• snakemake-workflows / cookiecutter-snakemake-workflow
  A cookiecutter template for Snakemake workflows
  ☆57Updated 2 years ago
• inodb / snakemake-workflows
  An experimental repo for common snakemake rules and workflows
  ☆46Updated 9 years ago
• enormandeau / Scripts
  Collection of various scripts
  ☆80Updated last month
• gogetdata / ggd-cli
  The command-line interface to GGD
  ☆42Updated 2 years ago
• peterjc / picobio
  Miscellaneous Bioinformatics scripts etc mostly in Python
  ☆45Updated last week
• foerstner-lab / READemption
  A pipeline for the computational evaluation of RNA-Seq data
  ☆37Updated 4 months ago
• phasegenomics / FALCON-Phase
  FALCON-Phase integrates PacBio long-read assemblies with Phase Genomics Hi-C data to create phased, diploid, chromosome-scale scaffolds
  ☆74Updated 4 years ago
• NCBI-Hackathons / FlowBio
  A fast, easy way to present complex bioinformatics pipelines to biologists
  ☆11Updated 6 years ago
• Snakemake-Profiles / doc
  Documentation of the Snakemake-Profiles project.
  ☆53Updated 2 years ago
• apierleoni / BioGraPy
  Biological Graphic tool in Python
  ☆34Updated 4 years ago
• dzerbino / oases
  De novo transcriptome assembler for short reads
  ☆62Updated 6 years ago
• clintval / genome-browser
  A lightweight Python graphing API for genomic features
  ☆15Updated 2 years ago
• goeckslab / isoseq-browser
  ☆13Updated 7 years ago
• bcgsc / orca
  Genomics Research Container Architecture
  ☆48Updated 5 years ago
• kevinblighe / ClinicalGradeDNAseq
  Automated next generation DNA sequencing analysis pipeline suited for clinical tests, with >99.9% sensitivity to Sanger sequencing at rea…
  ☆25Updated 4 years ago
• biocorecrg / BioNextflow
  A collection of modules and sub-workflows for Nextflow
  ☆26Updated this week
• drio / bio.brew
  A tiny package manager for crucial unix and bioinformatics tools
  ☆27Updated 9 years ago
• umd-byob / presentations
  Bring Your Own Bioinformatics
  ☆27Updated 8 years ago
• NBISweden / pipelines-nextflow
  A set of workflows written in Nextflow for Genome Annotation.
  ☆44Updated 6 months ago
• BIMSBbioinfo / pigx_sars-cov-2
  PiGx SARS-CoV-2 wastewater sequencing pipeline
  ☆18Updated last year
• stevekm / Bioinformatics
  Bioinformatics analysis scripts, workflows, general code examples
  ☆53Updated 3 years ago
• conchoecia / pauvre
  Pauvre: QC and genome browser plotting Oxford Nanopore and PacBio long reads.
  ☆52Updated 2 months ago
• biocore / redbiom
  Sample search by metadata and features
  ☆45Updated last year
• neherlab / pan-genome-visualization
  Visualization of the pan-genome output by panX
  ☆62Updated last year
• tseemann / homebrew-bioinformatics-linux
  Homebrew formulae for bioinformatics software only available for Linux
  ☆27Updated 5 years ago
• Ensembl / ensembl-analysis
  Modules to interface with tools used in Ensembl Gene Annotation Process and scripts to run pipelines
  ☆17Updated last month